(cache)NCBI Blast:gb|JBMPPE010000023.1|

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Search Parameters
Search parameter name	Search parameter value
Program	blastn
Word size	28
Expect value	0.05
Hitlist size	100
Match/Mismatch scores	1,-2
Gapcosts	0,2.5
Low Complexity Filter	Yes
Filter string	L;m;
Genetic Code	1

Database
Database parameter name	Database parameter value
Posted date	Nov 20, 2025 10:54 PM
Number of letters	3,274,125,448,754
Number of sequences	119,617,459
Entrez query	Includes: Excludes: None

Karlin-Altschul statistics
Params	Ungapped	Gapped
Lambda	1.33271	1.28
K	0.620991	0.46
H	1.12409	0.85

Results Statistics
Results Statistics parameter name	Results Statistics parameter value
Length adjustment	38
Effective length of query	620
Effective length of database	3269579985312
Effective search space	2027139590893440
Effective search space used	2027139590893440

Job Title

gb|JBMPPE010000023.1| ...

RID

JVPDXW37016 Search expires on 12-03 01:09 am

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Results for

Program

BLASTN

Citation

Database

See details

Title:Nucleotide collection (nt)
Description:The nucleotide collection consists of GenBank+EMBL+DDBJ+PDB+RefSeq sequences, but excludes EST, STS, GSS, WGS, TSA, patent sequences as well as phase 0, 1, and 2 HTGS sequences and sequences longer than 100Mb. The database is non-redundant. Identical sequences have been merged into one entry, while preserving the accession, GI, title and taxonomy information for each entry.
Molecule Type:mixed DNA
Update date:2025/11/24
Number of sequences:119617459

Query ID

JBMPPE010000023.1

Description

Undibacterium sp. RuTC16W NODE_26_length_658_cov_0.355932, whole genome shotgun sequence ...

Molecule type

dna

Query Length

658

Other reports

Distance tree of results MSA viewer

Filter Results

Descriptions

select all
14 sequences selected

, Reading indexes 1-5, displaying indexes 1-5

Sequences producing significant alignments:
Select for downloading or viewing reports	Description	Scientific Name	Common Name	Taxid	Max Score	Total Score	Query Cover	Per. Ident	Acc. Len	Accession
1Select seq PQ335233.1	MAG: Guadeloupe Culex rhabdovirus isolate AR883029/GCRV, complete genome	Guadeloupe Culex rhabdovirus	NA	2607740	1199	1199	100%	99.54%	14332	PQ335233.1
2Select seq MG385079.1	Grenada mosquito rhabdovirus 1, complete genome	Grenada mosquito rhabdovirus 1	NA	2125980	1194	1194	100%	99.39%	14420	MG385079.1
3Select seq MN013393.1	Guadeloupe Culex rhabdovirus strain 2016-Ab-CQF, complete genome	Guadeloupe Culex rhabdovirus	NA	2607740	1188	1188	100%	99.24%	14389	MN013393.1
4Select seq MN013392.1	Guadeloupe Culex rhabdovirus strain 2017-PB-CQM-1-1, complete genome	Guadeloupe Culex rhabdovirus	NA	2607740	1188	1188	100%	99.24%	14244	MN013392.1
5Select seq MN013391.1	Guadeloupe Culex rhabdovirus strain 2017-PB-CQM-5, complete genome	Guadeloupe Culex rhabdovirus	NA	2607740	1188	1188	100%	99.24%	14257	MN013391.1
6Select seq MN013388.1	Guadeloupe Culex rhabdovirus strain 2017-PB-CQF-5, complete genome	Guadeloupe Culex rhabdovirus	NA	2607740	1188	1188	100%	99.24%	14362	MN013388.1
7Select seq MN013387.1	Guadeloupe Culex rhabdovirus strain 2017-PB-CQF-1-5, complete genome	Guadeloupe Culex rhabdovirus	NA	2607740	1188	1188	100%	99.24%	14365	MN013387.1
8Select seq MN013386.1	Guadeloupe Culex rhabdovirus strain 2017-PB-CQM-1-3, complete genome	Guadeloupe Culex rhabdovirus	NA	2607740	1188	1188	100%	99.24%	14405	MN013386.1
9Select seq OQ968280.1	MAG: Cururu virus isolate JARP12, complete genome	Cururu virus	NA	2083159	1188	1188	100%	99.24%	14166	OQ968280.1
10Select seq MH707450.1	Grenada mosquito rhabdovirus 1 isolate IVRI-2017, complete genome	Grenada mosquito rhabdovirus 1	NA	2125980	1182	1182	100%	99.09%	14420	MH707450.1
11Select seq MN013390.1	Guadeloupe Culex rhabdovirus strain 2017-PB-CQM-1-5, complete genome	Guadeloupe Culex rhabdovirus	NA	2607740	1177	1177	100%	98.94%	14384	MN013390.1
12Select seq MN013389.1	Guadeloupe Culex rhabdovirus strain 2017-PB-CQM-1-4, complete genome	Guadeloupe Culex rhabdovirus	NA	2607740	1177	1177	100%	98.94%	14384	MN013389.1
13Select seq OR479697.1	Guadeloupe Culex rhabdovirus strain Cqu1 VP1, VP2, VP3, G, and L genes, complete cds	Guadeloupe Culex rhabdovirus	NA	2607740	1177	1177	100%	98.94%	14362	OR479697.1
14Select seq OR479696.1	Guadeloupe Culex rhabdovirus strain Cqu30 VP1, VP2, VP3, G, and L genes, complete cds	Guadeloupe Culex rhabdovirus	NA	2607740	1177	1177	100%	98.94%	14362	OR479696.1

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  The graphic is an overview of the database sequences aligned to the query sequence. These are represented horizontal bars colored coded by score and showing the extent of the alignment on the query sequence. Separate aligned regions on the same database sequence are connected by a thin grey line. Mousing over an alignment shows the database sequence title. Clicking an alignment displays a box with more details about the alignment and link to the sequence alignment itself in the Alignments section of the report.
- 14 sequences selected
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Distribution of the top 14 Blast Hits on 14 subject sequences

Query

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Alignments

14 sequences selected
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Download GenBank Graphics Next Previous Descriptions

MAG: Guadeloupe Culex rhabdovirus isolate AR883029/GCRV, complete genome

Sequence ID: PQ335233.1Length: 14332Number of Matches: 1

Range 1: 13312 to 13969GenBank Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
1199 bits(649)	0.0()	655/658(99%)	0/658(0%)	Plus/Minus

Query  1      AAGAGGAAATTTCGACCTAGACAAGATCTCTAAAAGATTGCGGGTGTTCTCCATATCATC  60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13969  AAGAGGAAATTTCGACCTAGACAAGATCTCTAAAAGATTGCGGGTGTTCTCCATATCATC  13910

Query  61     CACAAACAAGGGGATCGGTCTGAATTTCCACGGTAGGGTGTTCGTGGCATCTCCACTGAT  120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13909  CACAAACAAGGGGATCGGTCTGAATTTCCACGGTAGGGTGTTCGTGGCATCTCCACTGAT  13850

Query  121    CGGGAAAGGTTGGTCACAGTATGGGATGGGTGTTGGGATTGCCTGGTAGATCCATCTTGG  180
              |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct  13849  CGGGAAAGGTTGGTCACAGTATGGGATGGGTGTTGGGATTGCCTTGTAGATCCATCTTGG  13790

Query  181    AAAGTCGAAACTTCTAGGAGACTTGAATTCGATCATACGAAGCTGTTTGAATACTCGTCT  240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13789  AAAGTCGAAACTTCTAGGAGACTTGAATTCGATCATACGAAGCTGTTTGAATACTCGTCT  13730

Query  241    AAATCTACCGAGGATTGTCAAGACAGATTTCCGACTGGCAAGGGAAAAGTCCTCGTTCTT  300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  13729  AAATCTACCGAGGATTGTCAAGACAGATTTCCGACTGGCAAGGGAAAAGTCCTCGTTCTC  13670

Query  301    AATTCGCACTAGGGCTGAAAAACGATACCATTTCCGTGTTTCTGGAACGAGAGGGTAAAG  360
              |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct  13669  AATTCGCACTAGGGCTGAAAAACGATACCATTTCCGTGTTTCCGGAACGAGAGGGTAAAG  13610

Query  361    GCTCCATCCACCGTCCATGCTTTGGAAGCAGACCAGTTCGACCTTGGCCATTAACTCCAC  420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13609  GCTCCATCCACCGTCCATGCTTTGGAAGCAGACCAGTTCGACCTTGGCCATTAACTCCAC  13550

Query  421    AAACTGGAGCCAATAGAACTCTGGGGCGTCGTCAATCATTAAGGATATTCCATATGCAAT  480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13549  AAACTGGAGCCAATAGAACTCTGGGGCGTCGTCAATCATTAAGGATATTCCATATGCAAT  13490

Query  481    AAAGAAATCTCTGATCAAACCGTTGCGGATCTTGGGAGTAAAATAACTGATCTGCCACGT  540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13489  AAAGAAATCTCTGATCAAACCGTTGCGGATCTTGGGAGTAAAATAACTGATCTGCCACGT  13430

Query  541    TGCCGGGTGTCCTCGATGCAGTTTAACTGGGGCATAACTTCGACGCACAGACTCTAGGTA  600
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13429  TGCCGGGTGTCCTCGATGCAGTTTAACTGGGGCATAACTTCGACGCACAGACTCTAGGTA  13370

Query  601    CGTCATTGGGAAGTTGAAAACTCCCTTGATAGAAAACCGCTCTACAAAGGACAAGAGG  658
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13369  CGTCATTGGGAAGTTGAAAACTCCCTTGATAGAAAACCGCTCTACAAAGGACAAGAGG  13312

Download GenBank Graphics Next Previous Descriptions

Grenada mosquito rhabdovirus 1, complete genome

Sequence ID: MG385079.1Length: 14420Number of Matches: 1

Range 1: 13329 to 13986GenBank Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
1194 bits(646)	0.0()	654/658(99%)	0/658(0%)	Plus/Minus

Query  1      AAGAGGAAATTTCGACCTAGACAAGATCTCTAAAAGATTGCGGGTGTTCTCCATATCATC  60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13986  AAGAGGAAATTTCGACCTAGACAAGATCTCTAAAAGATTGCGGGTGTTCTCCATATCATC  13927

Query  61     CACAAACAAGGGGATCGGTCTGAATTTCCACGGTAGGGTGTTCGTGGCATCTCCACTGAT  120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13926  CACAAACAAGGGGATCGGTCTGAATTTCCACGGTAGGGTGTTCGTGGCATCTCCACTGAT  13867

Query  121    CGGGAAAGGTTGGTCACAGTATGGGATGGGTGTTGGGATTGCCTGGTAGATCCATCTTGG  180
              |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct  13866  CGGGAAAGGTTGGTCACAATATGGGATGGGTGTTGGGATTGCCTGGTAGATCCATCTTGG  13807

Query  181    AAAGTCGAAACTTCTAGGAGACTTGAATTCGATCATACGAAGCTGTTTGAATACTCGTCT  240
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct  13806  AAAGTCGAAACTTCTAGGAGACTTGAATTCGATCATCCGAAGCTGTTTGAATACTCGTCT  13747

Query  241    AAATCTACCGAGGATTGTCAAGACAGATTTCCGACTGGCAAGGGAAAAGTCCTCGTTCTT  300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  13746  AAATCTACCGAGGATTGTCAAGACAGATTTCCGACTGGCAAGGGAAAAGTCCTCGTTCTC  13687

Query  301    AATTCGCACTAGGGCTGAAAAACGATACCATTTCCGTGTTTCTGGAACGAGAGGGTAAAG  360
              |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct  13686  AATTCGCACTAGGGCTGAAAAACGATACCATTTCCGTGTTTCCGGAACGAGAGGGTAAAG  13627

Query  361    GCTCCATCCACCGTCCATGCTTTGGAAGCAGACCAGTTCGACCTTGGCCATTAACTCCAC  420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13626  GCTCCATCCACCGTCCATGCTTTGGAAGCAGACCAGTTCGACCTTGGCCATTAACTCCAC  13567

Query  421    AAACTGGAGCCAATAGAACTCTGGGGCGTCGTCAATCATTAAGGATATTCCATATGCAAT  480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13566  AAACTGGAGCCAATAGAACTCTGGGGCGTCGTCAATCATTAAGGATATTCCATATGCAAT  13507

Query  481    AAAGAAATCTCTGATCAAACCGTTGCGGATCTTGGGAGTAAAATAACTGATCTGCCACGT  540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13506  AAAGAAATCTCTGATCAAACCGTTGCGGATCTTGGGAGTAAAATAACTGATCTGCCACGT  13447

Query  541    TGCCGGGTGTCCTCGATGCAGTTTAACTGGGGCATAACTTCGACGCACAGACTCTAGGTA  600
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13446  TGCCGGGTGTCCTCGATGCAGTTTAACTGGGGCATAACTTCGACGCACAGACTCTAGGTA  13387

Query  601    CGTCATTGGGAAGTTGAAAACTCCCTTGATAGAAAACCGCTCTACAAAGGACAAGAGG  658
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13386  CGTCATTGGGAAGTTGAAAACTCCCTTGATAGAAAACCGCTCTACAAAGGACAAGAGG  13329

Download GenBank Graphics Next Previous Descriptions

Guadeloupe Culex rhabdovirus strain 2016-Ab-CQF, complete genome

Sequence ID: MN013393.1Length: 14389Number of Matches: 1

Range 1: 13352 to 14009GenBank Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
1188 bits(643)	0.0()	653/658(99%)	0/658(0%)	Plus/Minus

Query  1      AAGAGGAAATTTCGACCTAGACAAGATCTCTAAAAGATTGCGGGTGTTCTCCATATCATC  60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  14009  AAGAGGAAATTTCGACCTAGACAAGATCTCTAAAAGATTGCGGGTGTTCTCCATATCATC  13950

Query  61     CACAAACAAGGGGATCGGTCTGAATTTCCACGGTAGGGTGTTCGTGGCATCTCCACTGAT  120
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct  13949  CACAAACAAGGGGATCGGTCTGAATTTCCACGGTAGGGTGTTCGTGGCATCTCCCCTGAT  13890

Query  121    CGGGAAAGGTTGGTCACAGTATGGGATGGGTGTTGGGATTGCCTGGTAGATCCATCTTGG  180
              ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  13889  CGGGAAAGGTTGGTCACAGTATGGGATGGGTGTTGGGATTGACTGGTAGATCCATCTTGG  13830

Query  181    AAAGTCGAAACTTCTAGGAGACTTGAATTCGATCATACGAAGCTGTTTGAATACTCGTCT  240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13829  AAAGTCGAAACTTCTAGGAGACTTGAATTCGATCATACGAAGCTGTTTGAATACTCGTCT  13770

Query  241    AAATCTACCGAGGATTGTCAAGACAGATTTCCGACTGGCAAGGGAAAAGTCCTCGTTCTT  300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  13769  AAATCTACCGAGGATTGTCAAGACAGATTTCCGACTGGCAAGGGAAAAGTCCTCGTTCTC  13710

Query  301    AATTCGCACTAGGGCTGAAAAACGATACCATTTCCGTGTTTCTGGAACGAGAGGGTAAAG  360
              |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct  13709  AATTCGCACTAGGGCTGAAAAACGATACCATTTCCGTGTTTCCGGAACGAGAGGGTAAAG  13650

Query  361    GCTCCATCCACCGTCCATGCTTTGGAAGCAGACCAGTTCGACCTTGGCCATTAACTCCAC  420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13649  GCTCCATCCACCGTCCATGCTTTGGAAGCAGACCAGTTCGACCTTGGCCATTAACTCCAC  13590

Query  421    AAACTGGAGCCAATAGAACTCTGGGGCGTCGTCAATCATTAAGGATATTCCATATGCAAT  480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13589  AAACTGGAGCCAATAGAACTCTGGGGCGTCGTCAATCATTAAGGATATTCCATATGCAAT  13530

Query  481    AAAGAAATCTCTGATCAAACCGTTGCGGATCTTGGGAGTAAAATAACTGATCTGCCACGT  540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13529  AAAGAAATCTCTGATCAAACCGTTGCGGATCTTGGGAGTAAAATAACTGATCTGCCACGT  13470

Query  541    TGCCGGGTGTCCTCGATGCAGTTTAACTGGGGCATAACTTCGACGCACAGACTCTAGGTA  600
              ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct  13469  TGCCGGGTGTCCTCGATGCAGTTTAACGGGGGCATAACTTCGACGCACAGACTCTAGGTA  13410

Query  601    CGTCATTGGGAAGTTGAAAACTCCCTTGATAGAAAACCGCTCTACAAAGGACAAGAGG  658
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13409  CGTCATTGGGAAGTTGAAAACTCCCTTGATAGAAAACCGCTCTACAAAGGACAAGAGG  13352

Download GenBank Graphics Next Previous Descriptions

Guadeloupe Culex rhabdovirus strain 2017-PB-CQM-1-1, complete genome

Sequence ID: MN013392.1Length: 14244Number of Matches: 1

Range 1: 13330 to 13987GenBank Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
1188 bits(643)	0.0()	653/658(99%)	0/658(0%)	Plus/Minus

Query  1      AAGAGGAAATTTCGACCTAGACAAGATCTCTAAAAGATTGCGGGTGTTCTCCATATCATC  60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13987  AAGAGGAAATTTCGACCTAGACAAGATCTCTAAAAGATTGCGGGTGTTCTCCATATCATC  13928

Query  61     CACAAACAAGGGGATCGGTCTGAATTTCCACGGTAGGGTGTTCGTGGCATCTCCACTGAT  120
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct  13927  CACAAACAAGGGGATCGGTCTGAATTTCCACGGTAGGGTGTTCGTGGCATCTCCCCTGAT  13868

Query  121    CGGGAAAGGTTGGTCACAGTATGGGATGGGTGTTGGGATTGCCTGGTAGATCCATCTTGG  180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13867  CGGGAAAGGTTGGTCACAGTATGGGATGGGTGTTGGGATTGCCTGGTAGATCCATCTTGG  13808

Query  181    AAAGTCGAAACTTCTAGGAGACTTGAATTCGATCATACGAAGCTGTTTGAATACTCGTCT  240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13807  AAAGTCGAAACTTCTAGGAGACTTGAATTCGATCATACGAAGCTGTTTGAATACTCGTCT  13748

Query  241    AAATCTACCGAGGATTGTCAAGACAGATTTCCGACTGGCAAGGGAAAAGTCCTCGTTCTT  300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  13747  AAATCTACCGAGGATTGTCAAGACAGATTTCCGACTGGCAAGGGAAAAGTCCTCGTTCTC  13688

Query  301    AATTCGCACTAGGGCTGAAAAACGATACCATTTCCGTGTTTCTGGAACGAGAGGGTAAAG  360
              |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct  13687  AATTCGCACTAGGGCTGAAAAACGATACCATTTCCGTGTTTCCGGAACGAGAGGGTAAAG  13628

Query  361    GCTCCATCCACCGTCCATGCTTTGGAAGCAGACCAGTTCGACCTTGGCCATTAACTCCAC  420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13627  GCTCCATCCACCGTCCATGCTTTGGAAGCAGACCAGTTCGACCTTGGCCATTAACTCCAC  13568

Query  421    AAACTGGAGCCAATAGAACTCTGGGGCGTCGTCAATCATTAAGGATATTCCATATGCAAT  480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13567  AAACTGGAGCCAATAGAACTCTGGGGCGTCGTCAATCATTAAGGATATTCCATATGCAAT  13508

Query  481    AAAGAAATCTCTGATCAAACCGTTGCGGATCTTGGGAGTAAAATAACTGATCTGCCACGT  540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13507  AAAGAAATCTCTGATCAAACCGTTGCGGATCTTGGGAGTAAAATAACTGATCTGCCACGT  13448

Query  541    TGCCGGGTGTCCTCGATGCAGTTTAACTGGGGCATAACTTCGACGCACAGACTCTAGGTA  600
              ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct  13447  TGCTGGGTGTCCTCGATGCAGTTTAACGGGGGCATAACTTCGACGCACAGACTCTAGGTA  13388

Query  601    CGTCATTGGGAAGTTGAAAACTCCCTTGATAGAAAACCGCTCTACAAAGGACAAGAGG  658
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13387  CGTCATTGGGAAGTTGAAAACTCCCTTGATAGAAAACCGCTCTACAAAGGACAAGAGG  13330

Download GenBank Graphics Next Previous Descriptions

Guadeloupe Culex rhabdovirus strain 2017-PB-CQM-5, complete genome

Sequence ID: MN013391.1Length: 14257Number of Matches: 1

Range 1: 13346 to 14003GenBank Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
1188 bits(643)	0.0()	653/658(99%)	0/658(0%)	Plus/Minus

Query  1      AAGAGGAAATTTCGACCTAGACAAGATCTCTAAAAGATTGCGGGTGTTCTCCATATCATC  60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  14003  AAGAGGAAATTTCGACCTAGACAAGATCTCTAAAAGATTGCGGGTGTTCTCCATATCATC  13944

Query  61     CACAAACAAGGGGATCGGTCTGAATTTCCACGGTAGGGTGTTCGTGGCATCTCCACTGAT  120
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct  13943  CACAAACAAGGGGATCGGTCTGAATTTCCACGGTAGGGTGTTCGTGGCATCTCCCCTGAT  13884

Query  121    CGGGAAAGGTTGGTCACAGTATGGGATGGGTGTTGGGATTGCCTGGTAGATCCATCTTGG  180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13883  CGGGAAAGGTTGGTCACAGTATGGGATGGGTGTTGGGATTGCCTGGTAGATCCATCTTGG  13824

Query  181    AAAGTCGAAACTTCTAGGAGACTTGAATTCGATCATACGAAGCTGTTTGAATACTCGTCT  240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13823  AAAGTCGAAACTTCTAGGAGACTTGAATTCGATCATACGAAGCTGTTTGAATACTCGTCT  13764

Query  241    AAATCTACCGAGGATTGTCAAGACAGATTTCCGACTGGCAAGGGAAAAGTCCTCGTTCTT  300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  13763  AAATCTACCGAGGATTGTCAAGACAGATTTCCGACTGGCAAGGGAAAAGTCCTCGTTCTC  13704

Query  301    AATTCGCACTAGGGCTGAAAAACGATACCATTTCCGTGTTTCTGGAACGAGAGGGTAAAG  360
              |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct  13703  AATTCGCACTAGGGCTGAAAAACGATACCATTTCCGTGTTTCCGGAACGAGAGGGTAAAG  13644

Query  361    GCTCCATCCACCGTCCATGCTTTGGAAGCAGACCAGTTCGACCTTGGCCATTAACTCCAC  420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13643  GCTCCATCCACCGTCCATGCTTTGGAAGCAGACCAGTTCGACCTTGGCCATTAACTCCAC  13584

Query  421    AAACTGGAGCCAATAGAACTCTGGGGCGTCGTCAATCATTAAGGATATTCCATATGCAAT  480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13583  AAACTGGAGCCAATAGAACTCTGGGGCGTCGTCAATCATTAAGGATATTCCATATGCAAT  13524

Query  481    AAAGAAATCTCTGATCAAACCGTTGCGGATCTTGGGAGTAAAATAACTGATCTGCCACGT  540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13523  AAAGAAATCTCTGATCAAACCGTTGCGGATCTTGGGAGTAAAATAACTGATCTGCCACGT  13464

Query  541    TGCCGGGTGTCCTCGATGCAGTTTAACTGGGGCATAACTTCGACGCACAGACTCTAGGTA  600
              ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct  13463  TGCTGGGTGTCCTCGATGCAGTTTAACGGGGGCATAACTTCGACGCACAGACTCTAGGTA  13404

Query  601    CGTCATTGGGAAGTTGAAAACTCCCTTGATAGAAAACCGCTCTACAAAGGACAAGAGG  658
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  13403  CGTCATTGGGAAGTTGAAAACTCCCTTGATAGAAAACCGCTCTACAAAGGACAAGAGG  13346

Taxonomy

14 sequences selected
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Lineage

Lineage Report
Organism	Blast Name	Score	Number of Hits	Description
Rhabdoviridae	viruses		14
.Guadeloupe Culex rhabdovirus	viruses	1199	11	Guadeloupe Culex rhabdovirus hits
.Grenada mosquito rhabdovirus 1	viruses	1194	2	Grenada mosquito rhabdovirus 1 hits
.Cururu virus	viruses	1188	1	Cururu virus hits

Organism

Organism Report
Description	Score	E value	Accession
Guadeloupe Culex rhabdovirus [viruses] Next Previous First
MAG: Guadeloupe Culex rhabdovirus isolate AR883029/GCRV, complete genome	1199	0.0	PQ335233
Guadeloupe Culex rhabdovirus strain 2016-Ab-CQF, complete genome	1188	0.0	MN013393
Guadeloupe Culex rhabdovirus strain 2017-PB-CQM-1-1, complete genome	1188	0.0	MN013392
Guadeloupe Culex rhabdovirus strain 2017-PB-CQM-5, complete genome	1188	0.0	MN013391
Guadeloupe Culex rhabdovirus strain 2017-PB-CQF-5, complete genome	1188	0.0	MN013388
Guadeloupe Culex rhabdovirus strain 2017-PB-CQF-1-5, complete genome	1188	0.0	MN013387
Guadeloupe Culex rhabdovirus strain 2017-PB-CQM-1-3, complete genome	1188	0.0	MN013386
Guadeloupe Culex rhabdovirus strain 2017-PB-CQM-1-5, complete genome	1177	0.0	MN013390
Guadeloupe Culex rhabdovirus strain 2017-PB-CQM-1-4, complete genome	1177	0.0	MN013389
Guadeloupe Culex rhabdovirus strain Cqu1 VP1, VP2, VP3, G, and L genes, complete cds	1177	0.0	OR479697
Guadeloupe Culex rhabdovirus strain Cqu30 VP1, VP2, VP3, G, and L genes, complete cds	1177	0.0	OR479696
Grenada mosquito rhabdovirus 1 [viruses] Next Previous First
Grenada mosquito rhabdovirus 1, complete genome	1194	0.0	MG385079
Grenada mosquito rhabdovirus 1 isolate IVRI-2017, complete genome	1182	0.0	MH707450
Cururu virus [viruses] Next Previous First
MAG: Cururu virus isolate JARP12, complete genome	1188	0.0	OQ968280

Taxonomy

Taxonomy Report
Taxonomy	Number of hits	Number of Organisms	Description
Rhabdoviridae	14	3
. Guadeloupe Culex rhabdovirus	11	1	Guadeloupe Culex rhabdovirus hits
. unclassified Rhabdoviridae	3	2
.. Grenada mosquito rhabdovirus 1	2	1	Grenada mosquito rhabdovirus 1 hits
.. Cururu virus	1	1	Cururu virus hits

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Sequences producing significant alignments