LOCUS       JAAQGR010000045         2197 bp    DNA     linear   BCT 13-APR-2022
DEFINITION  Clostridioides difficile strain TW12
            TW12_89_length_2139_cov_34.230480, whole genome shotgun sequence.
ACCESSION   JAAQGR010000045 JAAQGR010000000
VERSION     JAAQGR010000045.1
DBLINK      BioProject: PRJNA612412
            BioSample: SAMN14371829
KEYWORDS    WGS.
SOURCE      Clostridioides difficile (Clostridium difficile)
  ORGANISM  Clostridioides difficile
            Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales;
            Peptostreptococcaceae; Clostridioides.
REFERENCE   1  (bases 1 to 2197)
  AUTHORS   Li,T., Zhu,Y. and Guo,X.
  TITLE     Genome analysis of C. difficile RT078 strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2197)
  AUTHORS   Li,T., Zhu,Y. and Guo,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2020) Department of Microbiology and Immunology,
            Shanghai Jiaotong University School of Medicine, South Chongqing
            Road, Shanghai 200025, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method        :: A5-miseq v. 20150522
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..2197
                     /organism="Clostridioides difficile"
                     /mol_type="genomic DNA"
                     /submitter_seqid="TW12_89_length_2139_cov_34.230480"
                     /strain="TW12"
                     /isolation_source="feces"
                     /host="Sus scrofa"
                     /db_xref="taxon:1496"
                     /geo_loc_name="Taiwan"
                     /collection_date="25-Mar-2012"
ORIGIN      
        1 ccgcccttaa cacaatatat cttgtttttg tacaagtggt gtgaatggtt aaggtagtct
       61 atgtaatcca ctctatctcc aaaaccaatt ttctctaaca ccatcttgag tgcctcaaac
      121 caagctgggc taagtgatgc gtcgtatcct gtgtaatcaa aggcaaatag cttttcttcc
      181 atcaacactg ggatcttgct ccagaatagg tctggatcgc atccaactgc actaccagtg
      241 acgacccctg gattcctgtg gaatgctgca taaaggtttc caaatgccat tctcatggcc
      301 actgagtcat ttagactgga agcttcaatc agtctggatt ttccctgttc cacttttgtt
      361 ttggacctca gctcgtcctt gacatatgtc actaatggta ggttgattcc gtaagcgtcc
      421 aaaagtcttt gcatttcttt ggtgtctctg gtttgcttgt ttaggatatc tctcttcttc
      481 ttccccattg ccacgtaggg gtacccggca ctggtagaca gatctagcgc ctccagacca
      541 tcagtaccat acatggcgtc ttctagacac atttgctctg tgctgatatc cagcgacata
      601 agttgtccag cataatggtc cactgcctct ttcatgtact catccacctc agtgatcttg
      661 ttccctacat acttagagaa gattgcttct tcaaagtctg ttttgagtct gggatcattc
      721 tttgtgagga ctgctggttc ctttactcct tcaaacacat agtggaaagc actgggctcg
      781 agcttggtct tggttggggc gtttataatt ggataccctg cctcctttga tggtctcatc
      841 cactggattt caccttggct ctgagtgaag tatgaccgct tcagggccgc tgcaaaccca
      901 tgtgaaccat tcccaccaac gtgcatcccg atgactttcc cagtgcatgt gatgactcca
      961 ccacactgac cagctctggt tggaaagttg tacattagaa tacgagcagt ctggcgccca
     1021 ccgagattta ggtatccctg ctcagtcaca gcaccgacag gaacatacat gttggggtac
     1081 ttactagtgt tcacaatcag aactccatca ttcgtctcgg tgatttgagt gggtatgtgt
     1141 tgtctgatat ctctgaactt ttcatttctt ttgagggtta ttatggtgat ttccagatta
     1201 gtgcctgcct gatcttcgag ggctttagcg tctaggattt caacctcttt gccatcaatt
     1261 acaatactct caccaggtga ggcatgagtt ggtaaaatgg ccacgttgtc gtggactcct
     1321 agcattgtga actccccttt gctagtagtt gctgtaacaa tgtttctttt agccatagcc
     1381 actgcatagt caaacccagg cccttgcact tttgctgctc taatggtggg cacattgggt
     1441 cttttgtttg gcagaccagt gtatgctccc tggtgtccag cgaataactt gtacatgacg
     1501 tacacgacac cagccactgc ggcgaaagtt gtcactgcct gcaaaatggt cattgctcgg
     1561 ttaatgtttc tctctgtttg aacttggcta gtgatgttga cgatccatcc tttcttttca
     1621 caataatccc tcacttcctg ggagtcaact gcttgaagca gatcattgat gcattcaggg
     1681 gggggcctcg tcttgatgtc aattttcagg tctttgtact ggagtggtcc ttggaacaaa
     1741 gcctccatgc aattgccaat gttagatctt ctgtttctct cgttgataat cattgtagta
     1801 atctggtcaa cactgtacct aactctggaa gatttgtcca ttaactgaat tgccttacca
     1861 cacactaaag gacagcatct tttgaagttt gctggttggt ggcagtcctt gcacgtctca
     1921 gtagccattg ccatgttgag tttaccatct ctggagtact cgcccatcac ttgaatatcc
     1981 atatcgaaag cgaacctcct ggccagagcg tcactgtggg ctactgtagg tggtgtgatg
     2041 cgactggagt tggtggaggc taaaacatag ttggatgtga acagaatgcc tttctcttcc
     2101 agcgaggcca taggtgggat aaactccaca gtggacacca tttgacaaaa gagcttcata
     2161 tctgccccat ccgggttttg gtttaggtcg tccatga
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