(cache)NCBI Blast:gb|MN611520.1|

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Search Parameters
Search parameter name	Search parameter value
Program	blastn
Word size	28
Expect value	0.05
Hitlist size	100
Match/Mismatch scores	1,-2
Gapcosts	0,0
Low Complexity Filter	Yes
Filter string	L;m;
Genetic Code	1

Database
Database parameter name	Database parameter value
Posted date
Number of letters	6,864,875,299
Number of sequences	47,362,704
Entrez query	Includes: Excludes: None

Karlin-Altschul statistics
Params	Ungapped	Gapped
Lambda	1.33271	1.28
K	0.620991	0.46
H	1.12409	0.85

Results Statistics
Results Statistics parameter name	Results Statistics parameter value
Length adjustment	35
Effective length of query	30476
Effective length of database	5207180659
Effective search space	158694037763684
Effective search space used	158694037763684

Job Title

gb|MN611520.1| ...

RID

4P9VRNT2016 Search expires on 06-14 03:16 am

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Results for

Program

BLASTN

Citation

Database

SRA

See details

Query ID

SRA Blast search set information
Experiment	Runs
SRX4734343	SRR7896912 SRR7896916 SRR7896926 SRR7896936

MN611520.1

Description

Pipistrellus abramus bat coronavirus HKU5-related isolate BY140568, complete genome ...

Molecule type

nucleic acid

Query Length

30511

Other reports

Distance tree of results MSA viewer

Filter Results

Descriptions

select all
100 sequences selected

, Reading indexes 1-5, displaying indexes 1-5, Reading indexes 6-10, displaying indexes 6-10

Sequences producing significant alignments:
Select for downloading or viewing reports	Description	Max Score	Total Score	Query Cover	E value	Per. Ident	Acc. Len	Accession
1Select seq gnl\|SRA\|SRR7896912.5023293.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.5023293.1
2Select seq gnl\|SRA\|SRR7896912.5014418.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.5014418.1
3Select seq gnl\|SRA\|SRR7896912.5000657.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.5000657.1
4Select seq gnl\|SRA\|SRR7896912.4944835.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4944835.2
5Select seq gnl\|SRA\|SRR7896912.4944835.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4944835.1
6Select seq gnl\|SRA\|SRR7896912.4933950.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4933950.2
7Select seq gnl\|SRA\|SRR7896912.4828943.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4828943.2
8Select seq gnl\|SRA\|SRR7896912.4609261.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4609261.2
9Select seq gnl\|SRA\|SRR7896912.4531950.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4531950.2
10Select seq gnl\|SRA\|SRR7896912.4531950.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4531950.1
11Select seq gnl\|SRA\|SRR7896912.4449960.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4449960.1
12Select seq gnl\|SRA\|SRR7896912.4426536.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4426536.1
13Select seq gnl\|SRA\|SRR7896912.4416576.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4416576.2
14Select seq gnl\|SRA\|SRR7896912.4416576.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4416576.1
15Select seq gnl\|SRA\|SRR7896912.4311303.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4311303.1
16Select seq gnl\|SRA\|SRR7896912.4241477.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4241477.2
17Select seq gnl\|SRA\|SRR7896912.4241477.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4241477.1
18Select seq gnl\|SRA\|SRR7896912.4140324.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4140324.2
19Select seq gnl\|SRA\|SRR7896912.4140324.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4140324.1
20Select seq gnl\|SRA\|SRR7896912.4125695.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4125695.2
21Select seq gnl\|SRA\|SRR7896912.4048382.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.4048382.2
22Select seq gnl\|SRA\|SRR7896912.3991449.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3991449.2
23Select seq gnl\|SRA\|SRR7896912.3935308.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3935308.2
24Select seq gnl\|SRA\|SRR7896912.3807592.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3807592.1
25Select seq gnl\|SRA\|SRR7896912.3800461.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3800461.1
26Select seq gnl\|SRA\|SRR7896912.3655572.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3655572.1
27Select seq gnl\|SRA\|SRR7896912.3612706.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3612706.2
28Select seq gnl\|SRA\|SRR7896912.3612706.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3612706.1
29Select seq gnl\|SRA\|SRR7896912.3589232.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3589232.2
30Select seq gnl\|SRA\|SRR7896912.3575569.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3575569.1
31Select seq gnl\|SRA\|SRR7896912.3518696.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3518696.2
32Select seq gnl\|SRA\|SRR7896912.3389294.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3389294.1
33Select seq gnl\|SRA\|SRR7896912.3329462.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3329462.1
34Select seq gnl\|SRA\|SRR7896912.3317575.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3317575.2
35Select seq gnl\|SRA\|SRR7896912.3133936.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3133936.2
36Select seq gnl\|SRA\|SRR7896912.3133936.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3133936.1
37Select seq gnl\|SRA\|SRR7896912.3090821.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3090821.2
38Select seq gnl\|SRA\|SRR7896912.3068939.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3068939.2
39Select seq gnl\|SRA\|SRR7896912.3062263.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3062263.2
40Select seq gnl\|SRA\|SRR7896912.3045178.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3045178.2
41Select seq gnl\|SRA\|SRR7896912.3045178.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.3045178.1
42Select seq gnl\|SRA\|SRR7896912.2974777.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2974777.2
43Select seq gnl\|SRA\|SRR7896912.2974777.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2974777.1
44Select seq gnl\|SRA\|SRR7896912.2948465.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2948465.2
45Select seq gnl\|SRA\|SRR7896912.2930363.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2930363.2
46Select seq gnl\|SRA\|SRR7896912.2930363.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2930363.1
47Select seq gnl\|SRA\|SRR7896912.2897183.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2897183.2
48Select seq gnl\|SRA\|SRR7896912.2875323.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2875323.2
49Select seq gnl\|SRA\|SRR7896912.2875323.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2875323.1
50Select seq gnl\|SRA\|SRR7896912.2718672.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2718672.2
51Select seq gnl\|SRA\|SRR7896912.2690913.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2690913.2
52Select seq gnl\|SRA\|SRR7896912.2648364.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2648364.1
53Select seq gnl\|SRA\|SRR7896912.2646807.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2646807.1
54Select seq gnl\|SRA\|SRR7896912.2597008.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2597008.1
55Select seq gnl\|SRA\|SRR7896912.2570506.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2570506.2
56Select seq gnl\|SRA\|SRR7896912.2560575.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2560575.2
57Select seq gnl\|SRA\|SRR7896912.2559417.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2559417.1
58Select seq gnl\|SRA\|SRR7896912.2545404.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2545404.2
59Select seq gnl\|SRA\|SRR7896912.2545404.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2545404.1
60Select seq gnl\|SRA\|SRR7896912.2524314.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2524314.2
61Select seq gnl\|SRA\|SRR7896912.2516630.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2516630.2
62Select seq gnl\|SRA\|SRR7896912.2511974.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2511974.2
63Select seq gnl\|SRA\|SRR7896912.2494741.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2494741.2
64Select seq gnl\|SRA\|SRR7896912.2413895.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2413895.1
65Select seq gnl\|SRA\|SRR7896912.2393078.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2393078.1
66Select seq gnl\|SRA\|SRR7896912.2357167.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2357167.2
67Select seq gnl\|SRA\|SRR7896912.2356584.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2356584.1
68Select seq gnl\|SRA\|SRR7896912.2243212.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2243212.2
69Select seq gnl\|SRA\|SRR7896912.2243212.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2243212.1
70Select seq gnl\|SRA\|SRR7896912.2163165.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2163165.2
71Select seq gnl\|SRA\|SRR7896912.2146489.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2146489.2
72Select seq gnl\|SRA\|SRR7896912.2146489.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2146489.1
73Select seq gnl\|SRA\|SRR7896912.2131048.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2131048.2
74Select seq gnl\|SRA\|SRR7896912.2131048.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2131048.1
75Select seq gnl\|SRA\|SRR7896912.2107982.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2107982.1
76Select seq gnl\|SRA\|SRR7896912.2100774.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2100774.2
77Select seq gnl\|SRA\|SRR7896912.2048479.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.2048479.2
78Select seq gnl\|SRA\|SRR7896912.1972990.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.1972990.2
79Select seq gnl\|SRA\|SRR7896912.1972990.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.1972990.1
80Select seq gnl\|SRA\|SRR7896912.1902255.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.1902255.2
81Select seq gnl\|SRA\|SRR7896912.1724303.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.1724303.2
82Select seq gnl\|SRA\|SRR7896912.1724303.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.1724303.1
83Select seq gnl\|SRA\|SRR7896912.1686046.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.1686046.2
84Select seq gnl\|SRA\|SRR7896912.1683977.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.1683977.2
85Select seq gnl\|SRA\|SRR7896912.1604711.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.1604711.2
86Select seq gnl\|SRA\|SRR7896912.1604711.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.1604711.1
87Select seq gnl\|SRA\|SRR7896912.1573777.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.1573777.2
88Select seq gnl\|SRA\|SRR7896912.1573777.1	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.1573777.1
89Select seq gnl\|SRA\|SRR7896912.1462092.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.1462092.2
90Select seq gnl\|SRA\|SRR7896912.36990.2	SRX4734343	279	279	0%	2e-71	100.00%	151	SRA:SRR7896912.36990.2
91Select seq gnl\|SRA\|SRR7896912.5000657.2	SRX4734343	278	278	0%	6e-71	100.00%	150	SRA:SRR7896912.5000657.2
92Select seq gnl\|SRA\|SRR7896912.4933950.1	SRX4734343	278	278	0%	6e-71	100.00%	150	SRA:SRR7896912.4933950.1
93Select seq gnl\|SRA\|SRR7896912.4744405.2	SRX4734343	278	278	0%	6e-71	100.00%	150	SRA:SRR7896912.4744405.2
94Select seq gnl\|SRA\|SRR7896912.4744405.1	SRX4734343	278	278	0%	6e-71	100.00%	150	SRA:SRR7896912.4744405.1
95Select seq gnl\|SRA\|SRR7896912.3770339.1	SRX4734343	278	278	0%	6e-71	100.00%	150	SRA:SRR7896912.3770339.1
96Select seq gnl\|SRA\|SRR7896912.2516630.1	SRX4734343	278	278	0%	6e-71	100.00%	150	SRA:SRR7896912.2516630.1
97Select seq gnl\|SRA\|SRR7896912.2494741.1	SRX4734343	278	278	0%	6e-71	100.00%	150	SRA:SRR7896912.2494741.1
98Select seq gnl\|SRA\|SRR7896912.2048479.1	SRX4734343	278	278	0%	6e-71	100.00%	150	SRA:SRR7896912.2048479.1
99Select seq gnl\|SRA\|SRR7896912.1686046.1	SRX4734343	278	278	0%	6e-71	100.00%	150	SRA:SRR7896912.1686046.1
100Select seq gnl\|SRA\|SRR7896912.2701154.2	SRX4734343	276	276	0%	2e-70	100.00%	149	SRA:SRR7896912.2701154.2

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  The graphic is an overview of the database sequences aligned to the query sequence. These are represented horizontal bars colored coded by score and showing the extent of the alignment on the query sequence. Separate aligned regions on the same database sequence are connected by a thin grey line. Mousing over an alignment shows the database sequence title. Clicking an alignment displays a box with more details about the alignment and link to the sequence alignment itself in the Alignments section of the report.
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Distribution of the top 100 Blast Hits on 100 subject sequences

Query

1
6000
12000
18000
24000
30000

Alignments

100 sequences selected
Help

Download Graphics SRA Next Previous Descriptions

SRX4734343

Sequence ID: SRA:SRR7896912.5023293.1Length: 151Number of Matches: 1

Related Information

Range 1: 1 to 151Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
279 bits(151)	2e-71()	151/151(100%)	0/151(0%)	Plus/Minus

Query  27569  ATTTTATCCGTGTCAATACAGTTGCAGGCGGGGTTGTTATACCTGTTAACTATAGCAAAC  27628
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  151    ATTTTATCCGTGTCAATACAGTTGCAGGCGGGGTTGTTATACCTGTTAACTATAGCAAAC  92

Query  27629  CCTGGTTTGTCAAAAATTTTAATCAGCGTTGTCGCTGTACAAATTGTTTCTTTGCGCACT  27688
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  91     CCTGGTTTGTCAAAAATTTTAATCAGCGTTGTCGCTGTACAAATTGTTTCTTTGCGCACT  32

Query  27689  CAGCAACATATCTCGAGTGCACATTCATAAG  27719
              |||||||||||||||||||||||||||||||
Sbjct  31     CAGCAACATATCTCGAGTGCACATTCATAAG  1

Download Graphics SRA Next Previous Descriptions

SRX4734343

Sequence ID: SRA:SRR7896912.5014418.1Length: 151Number of Matches: 1

Related Information

Range 1: 1 to 151Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
279 bits(151)	2e-71()	151/151(100%)	0/151(0%)	Plus/Minus

Query  5847  GCAAGACTTCTGATATGAAGTGCAAGATGACCGATGTCTATTATCCTAAGCAGAGGTATA  5906
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  151   GCAAGACTTCTGATATGAAGTGCAAGATGACCGATGTCTATTATCCTAAGCAGAGGTATA  92

Query  5907  GTGCAGACTGCAATGTCGTAGTATACTCTCTGGATGGGAATACTTGGGCTGATGTAGATC  5966
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  91    GTGCAGACTGCAATGTCGTAGTATACTCTCTGGATGGGAATACTTGGGCTGATGTAGATC  32

Query  5967  CTGATCTGTCAGCTTTTTATATGAAGGATGG  5997
             |||||||||||||||||||||||||||||||
Sbjct  31    CTGATCTGTCAGCTTTTTATATGAAGGATGG  1

Download Graphics SRA Next Previous Descriptions

SRX4734343

Sequence ID: SRA:SRR7896912.5000657.1Length: 151Number of Matches: 1

Related Information

Range 1: 1 to 151Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
279 bits(151)	2e-71()	151/151(100%)	0/151(0%)	Plus/Minus

Query  28649  GCAGGCATGCATTTCGGTGCTTGCGACTTCCAACGTCTACCCTCTGAGGTGACGGTCGCA  28708
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  151    GCAGGCATGCATTTCGGTGCTTGCGACTTCCAACGTCTACCCTCTGAGGTGACGGTCGCA  92

Query  28709  AAACCAAATGTGCTGATAGCCCTGAAAATGATCAAACGCCAAGCGTATGGTACAAATTCT  28768
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  91     AAACCAAATGTGCTGATAGCCCTGAAAATGATCAAACGCCAAGCGTATGGTACAAATTCT  32

Query  28769  GGTGTTGCTATTTATCATAGGTATAAGGCAG  28799
              |||||||||||||||||||||||||||||||
Sbjct  31     GGTGTTGCTATTTATCATAGGTATAAGGCAG  1

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SRX4734343

Sequence ID: SRA:SRR7896912.4944835.2Length: 151Number of Matches: 1

Related Information

Range 1: 1 to 151Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
279 bits(151)	2e-71()	151/151(100%)	0/151(0%)	Plus/Plus

Query  5310  TGCTTAAGGAGATCAAATTCATTGTACCTGCTTTACAAGCTGCGTACCTCAAACATAAGG  5369
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1     TGCTTAAGGAGATCAAATTCATTGTACCTGCTTTACAAGCTGCGTACCTCAAACATAAGG  60

Query  5370  GTGGTGATTCCACTGAATTCATTGCCCTAATAATGGCATATGGTGATTGTACCTATGGTG  5429
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61    GTGGTGATTCCACTGAATTCATTGCCCTAATAATGGCATATGGTGATTGTACCTATGGTG  120

Query  5430  AACCTGACGACGCCTCCAGACTACTGCATAC  5460
             |||||||||||||||||||||||||||||||
Sbjct  121   AACCTGACGACGCCTCCAGACTACTGCATAC  151

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SRX4734343

Sequence ID: SRA:SRR7896912.4944835.1Length: 151Number of Matches: 1

Related Information

Range 1: 1 to 151Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
279 bits(151)	2e-71()	151/151(100%)	0/151(0%)	Plus/Minus

Query  5311  GCTTAAGGAGATCAAATTCATTGTACCTGCTTTACAAGCTGCGTACCTCAAACATAAGGG  5370
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  151   GCTTAAGGAGATCAAATTCATTGTACCTGCTTTACAAGCTGCGTACCTCAAACATAAGGG  92

Query  5371  TGGTGATTCCACTGAATTCATTGCCCTAATAATGGCATATGGTGATTGTACCTATGGTGA  5430
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  91    TGGTGATTCCACTGAATTCATTGCCCTAATAATGGCATATGGTGATTGTACCTATGGTGA  32

Query  5431  ACCTGACGACGCCTCCAGACTACTGCATACC  5461
             |||||||||||||||||||||||||||||||
Sbjct  31    ACCTGACGACGCCTCCAGACTACTGCATACC  1

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SRX4734343

Sequence ID: SRA:SRR7896912.4933950.2Length: 151Number of Matches: 1

Related Information

Range 1: 1 to 151Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
279 bits(151)	2e-71()	151/151(100%)	0/151(0%)	Plus/Plus

Query  27532  ATCAGATCATTACGTCCACTTATTGACATGAGGTCAAATTTTATCCGTGTCAATACAGTT  27591
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1      ATCAGATCATTACGTCCACTTATTGACATGAGGTCAAATTTTATCCGTGTCAATACAGTT  60

Query  27592  GCAGGCGGGGTTGTTATACCTGTTAACTATAGCAAACCCTGGTTTGTCAAAAATTTTAAT  27651
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61     GCAGGCGGGGTTGTTATACCTGTTAACTATAGCAAACCCTGGTTTGTCAAAAATTTTAAT  120

Query  27652  CAGCGTTGTCGCTGTACAAATTGTTTCTTTG  27682
              |||||||||||||||||||||||||||||||
Sbjct  121    CAGCGTTGTCGCTGTACAAATTGTTTCTTTG  151

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SRX4734343

Sequence ID: SRA:SRR7896912.4828943.2Length: 151Number of Matches: 1

Related Information

Range 1: 1 to 151Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
279 bits(151)	2e-71()	151/151(100%)	0/151(0%)	Plus/Plus

Query  24558  CACCATTATATGACCCCTATATGGAAGCTGCTTACACTTCTTCCCTATTGGGCAGTATTG  24617
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1      CACCATTATATGACCCCTATATGGAAGCTGCTTACACTTCTTCCCTATTGGGCAGTATTG  60

Query  24618  CTGGTGCTAGTTGGACAGCAGGTCTGTCGTCTTTCGCAGCAATACCATTTGCACAAAGTA  24677
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61     CTGGTGCTAGTTGGACAGCAGGTCTGTCGTCTTTCGCAGCAATACCATTTGCACAAAGTA  120

Query  24678  TCTTTTATCGCTTGAATGGTGTTGGCATCAC  24708
              |||||||||||||||||||||||||||||||
Sbjct  121    TCTTTTATCGCTTGAATGGTGTTGGCATCAC  151

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SRX4734343

Sequence ID: SRA:SRR7896912.4609261.2Length: 151Number of Matches: 1

Related Information

Range 1: 1 to 151Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
279 bits(151)	2e-71()	151/151(100%)	0/151(0%)	Plus/Plus

Query  607  CCAAAATGCAGCAGGAGAAGGTGTCATTGGCACAACCCTGCAGGGTAAGCGTGTTGGAAT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    CCAAAATGCAGCAGGAGAAGGTGTCATTGGCACAACCCTGCAGGGTAAGCGTGTTGGAAT  60

Query  667  GTTCTTCCCATTTGATGCAGATCTTGTTACTGGAGAGTTCCAATTTCTGCTTCGTAAGAA  726
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61   GTTCTTCCCATTTGATGCAGATCTTGTTACTGGAGAGTTCCAATTTCTGCTTCGTAAGAA  120

Query  727  GGGCTTCGGTGGCAACCGCTTCCGTGATGCT  757
            |||||||||||||||||||||||||||||||
Sbjct  121  GGGCTTCGGTGGCAACCGCTTCCGTGATGCT  151

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SRX4734343

Sequence ID: SRA:SRR7896912.4531950.2Length: 151Number of Matches: 1

Related Information

Range 1: 1 to 151Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
279 bits(151)	2e-71()	151/151(100%)	0/151(0%)	Plus/Plus

Query  5292  CAATGTTGATGTTGGATATGCTTAAGGAGATCAAATTCATTGTACCTGCTTTACAAGCTG  5351
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1     CAATGTTGATGTTGGATATGCTTAAGGAGATCAAATTCATTGTACCTGCTTTACAAGCTG  60

Query  5352  CGTACCTCAAACATAAGGGTGGTGATTCCACTGAATTCATTGCCCTAATAATGGCATATG  5411
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61    CGTACCTCAAACATAAGGGTGGTGATTCCACTGAATTCATTGCCCTAATAATGGCATATG  120

Query  5412  GTGATTGTACCTATGGTGAACCTGACGACGC  5442
             |||||||||||||||||||||||||||||||
Sbjct  121   GTGATTGTACCTATGGTGAACCTGACGACGC  151

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SRX4734343

Sequence ID: SRA:SRR7896912.4531950.1Length: 151Number of Matches: 1

Related Information

Range 1: 1 to 151Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
279 bits(151)	2e-71()	151/151(100%)	0/151(0%)	Plus/Minus

Query  5300  ATGTTGGATATGCTTAAGGAGATCAAATTCATTGTACCTGCTTTACAAGCTGCGTACCTC  5359
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  151   ATGTTGGATATGCTTAAGGAGATCAAATTCATTGTACCTGCTTTACAAGCTGCGTACCTC  92

Query  5360  AAACATAAGGGTGGTGATTCCACTGAATTCATTGCCCTAATAATGGCATATGGTGATTGT  5419
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  91    AAACATAAGGGTGGTGATTCCACTGAATTCATTGCCCTAATAATGGCATATGGTGATTGT  32

Query  5420  ACCTATGGTGAACCTGACGACGCCTCCAGAC  5450
             |||||||||||||||||||||||||||||||
Sbjct  31    ACCTATGGTGAACCTGACGACGCCTCCAGAC  1

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