(cache)NCBI Blast:gb|MI815712.1|

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Search Parameters
Search parameter name	Search parameter value
Program	blastn
Word size	28
Expect value	0.05
Hitlist size	100
Match/Mismatch scores	1,-2
Gapcosts	0,2.5
Low Complexity Filter	Yes
Filter string	L;m;
Genetic Code	1

Database
Database parameter name	Database parameter value
Posted date	Feb 19, 2025 7:30 PM
Number of letters	2,724,147,260,061
Number of sequences	112,591,598
Entrez query	Includes: Excludes: None

Karlin-Altschul statistics
Params	Ungapped	Gapped
Lambda	1.33271	1.28
K	0.620991	0.46
H	1.12409	0.85

Results Statistics
Results Statistics parameter name	Results Statistics parameter value
Length adjustment	35
Effective length of query	48
Effective length of database	2720206554131
Effective search space	130569914598288
Effective search space used	130569914598288

Job Title

gb|MI815712.1| ...

RID

VP58KYY9013 Search expires on 02-24 19:31 pm

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BLASTN

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Database

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Title:Nucleotide collection (nt)
Description:The nucleotide collection consists of GenBank+EMBL+DDBJ+PDB+RefSeq sequences, but excludes EST, STS, GSS, WGS, TSA, patent sequences as well as phase 0, 1, and 2 HTGS sequences and sequences longer than 100Mb. The database is non-redundant. Identical sequences have been merged into one entry, while preserving the accession, GI, title and taxonomy information for each entry.
Molecule Type:mixed DNA
Update date:2025/02/22
Number of sequences:112591598

Query ID

MI815712.1

Description

Sequence 5 from patent US 9988674 ...

Molecule type

dna

Query Length

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100 sequences selected

, Reading indexes 1-5, displaying indexes 1-5, Reading indexes 6-10, displaying indexes 6-10

Sequences producing significant alignments:
Select for downloading or viewing reports	Description	Scientific Name	Common Name	Taxid	Max Score	Total Score	Query Cover	E value	Per. Ident	Acc. Len	Accession
1Select seq LC580288.1	Synthliboramphus antiquus AM16-17 DNA, microsatellite: Sa77	Synthliboramphus antiquus	ancient murrelet	28708	132	132	86%	2e-26	100.00%	251	LC580288.1
2Select seq MT364888.1	Human alphaherpesvirus 2, partial genome	Human alphaherpesvirus 2	NA	10310	132	132	86%	2e-26	100.00%	154695	MT364888.1
3Select seq LC580283.1	Synthliboramphus antiquus AM16-17 DNA, microsatellite: Sa23	Synthliboramphus antiquus	ancient murrelet	28708	117	117	83%	6e-22	97.10%	251	LC580283.1
4Select seq CP094103.1	Helicobacter pylori strain Hpfe077 chromosome, complete genome	Helicobacter pylori	NA	210	108	108	84%	3e-19	94.37%	1624315	CP094103.1
5Select seq OV196298.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	108	170	86%	3e-19	94.37%	30559	OV196298.1
6Select seq PQ462667.1	Escherichia phage HMD-P3, complete genome	Escherichia phage HMD-P3	NA	3374743	104	209	86%	4e-18	93.06%	109002	PQ462667.1
7Select seq OR360270.1	Enterococcus phage SSMH01, complete genome	Enterococcus phage SSMH01	NA	3075855	104	164	86%	4e-18	93.06%	41704	OR360270.1
8Select seq CP107088.1	Yersinia enterocolitica strain Gp200 chromosome	Yersinia enterocolitica	NA	630	104	104	86%	4e-18	93.06%	4530554	CP107088.1
9Select seq OV197189.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	104	104	86%	4e-18	93.15%	30094	OV197189.1
10Select seq OV197136.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	104	104	86%	4e-18	92.96%	30102	OV197136.1
11Select seq OV196488.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	104	104	86%	4e-18	93.06%	30094	OV196488.1
12Select seq OV196275.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	104	203	86%	4e-18	93.06%	30423	OV196275.1
13Select seq OV195924.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	104	205	86%	4e-18	93.15%	30333	OV195924.1
14Select seq OV195900.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	104	175	86%	4e-18	92.96%	30109	OV195900.1
15Select seq OV197539.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	99.0	99.0	86%	2e-16	91.67%	30057	OV197539.1
16Select seq OV196499.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	99.0	99.0	86%	2e-16	91.55%	30525	OV196499.1
17Select seq OV195202.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	99.0	197	86%	2e-16	91.55%	30221	OV195202.1
18Select seq OV195277.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	99.0	99.0	86%	2e-16	91.67%	30090	OV195277.1
19Select seq CP094108.1	Helicobacter pylori strain Hpfe073 chromosome, complete genome	Helicobacter pylori	NA	210	97.1	97.1	84%	7e-16	91.55%	1607927	CP094108.1
20Select seq OV016109.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	95.3	95.3	86%	3e-15	90.41%	30090	OV016109.1
21Select seq OV197600.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	93.5	93.5	86%	1e-14	90.28%	30105	OV197600.1
22Select seq LC529902.1	Asarum shuttleworthii chloroplast DNA, nearly complete sequence	Asarum shuttleworthii	NA	76096	93.5	215	86%	1e-14	90.14%	164538	LC529902.1
23Select seq LC529901.1	Asarum satsumense chloroplast DNA, nearly complete sequence	Asarum satsumense	NA	76106	93.5	186	86%	1e-14	90.14%	164607	LC529901.1
24Select seq KY965816.2	Lasthenia californica chloroplast	Lasthenia californica	NA	149440	91.6	183	84%	3e-14	90.00%	151993	KY965816.2
25Select seq OY637058.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	91.6	91.6	70%	3e-14	94.92%	29853	OY637058.1
26Select seq LC768493.1	Klebsiella phage phiKp_23 DNA, sequence_id:phiKp_23-1, partial sequence	Klebsiella phage phiKp_23	NA	2979980	91.6	91.6	86%	3e-14	90.28%	140855	LC768493.1
27Select seq OV197487.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	91.6	91.6	77%	3e-14	92.31%	30104	OV197487.1
28Select seq OV196273.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	91.6	91.6	86%	3e-14	88.89%	30444	OV196273.1
29Select seq PQ336906.1	Salmonella phage CHRF_10034, partial genome	Salmonella phage CHRF_10034	NA	3377761	89.8	89.8	86%	1e-13	89.33%	44975	PQ336906.1
30Select seq OV196890.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	86.1	86.1	70%	2e-12	93.10%	30101	OV196890.1
31Select seq PQ336902.1	Salmonella phage CHRF_10023.1, partial genome	Salmonella phage CHRF_10023.1	NA	3377757	84.2	84.2	86%	6e-12	88.00%	45880	PQ336902.1
32Select seq OY636195.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	84.2	84.2	72%	6e-12	91.80%	29852	OY636195.1
33Select seq OY654433.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	84.2	84.2	69%	6e-12	93.10%	29830	OY654433.1
34Select seq OV197187.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	84.2	84.2	76%	6e-12	90.62%	30208	OV197187.1
35Select seq OY635503.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	82.4	82.4	71%	2e-11	91.53%	29836	OY635503.1
36Select seq OY636767.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	80.5	80.5	73%	7e-11	90.16%	29479	OY636767.1
37Select seq OY702405.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	80.5	80.5	70%	7e-11	91.38%	29864	OY702405.1
38Select seq OY650818.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	80.5	80.5	70%	7e-11	91.53%	29859	OY650818.1
39Select seq OV195597.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	80.5	80.5	70%	7e-11	91.38%	30117	OV195597.1
40Select seq CP020369.1	Pseudomonas tolaasii strain 2192T chromosome	Pseudomonas tolaasii	NA	29442	78.7	2292	67%	3e-10	97.78%	6856683	CP020369.1
41Select seq OY712705.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	78.7	78.7	72%	3e-10	90.00%	29840	OY712705.1
42Select seq OV377772.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	78.7	78.7	75%	3e-10	89.06%	30383	OV377772.1
43Select seq OY632263.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	76.8	76.8	64%	1e-09	92.45%	29431	OY632263.1
44Select seq OY697486.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	76.8	76.8	64%	1e-09	92.45%	29835	OY697486.1
45Select seq OY629456.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	76.8	76.8	64%	1e-09	92.45%	29806	OY629456.1
46Select seq OU471411.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	76.8	76.8	86%	1e-09	85.92%	30104	OU471411.1
47Select seq OY700800.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	75.0	75.0	70%	3e-09	89.66%	29828	OY700800.1
48Select seq OY712376.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	75.0	75.0	70%	3e-09	89.83%	29858	OY712376.1
49Select seq OY676908.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	75.0	75.0	66%	3e-09	91.07%	29700	OY676908.1
50Select seq OY694998.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	73.1	73.1	72%	1e-08	88.52%	29865	OY694998.1
51Select seq OV196177.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	73.1	73.1	72%	1e-08	88.33%	30003	OV196177.1
52Select seq OV196096.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	73.1	73.1	69%	1e-08	89.66%	29646	OV196096.1
53Select seq MT648647.1	Human gammaherpesvirus 4 isolate Necker-6, partial genome	human gammaherpesvirus 4	Epstein-Barr virus	10376	73.1	73.1	67%	1e-08	89.83%	160959	MT648647.1
54Select seq OU509537.1	Klebsiella pneumoniae phage strain 5899STDY8049230 genome assembly, chromosome: 1	Klebsiella pneumoniae phage	NA	1915306	73.1	73.1	65%	1e-08	90.74%	58588	OU509537.1
55Select seq OY635760.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	71.3	71.3	64%	5e-08	90.74%	29868	OY635760.1
56Select seq OY672891.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	71.3	71.3	64%	5e-08	90.74%	29827	OY672891.1
57Select seq JX069762.1	Cloning vector pFosill-2, complete sequence	Cloning vector pFosill-2	NA	1206908	71.3	71.3	89%	5e-08	85.33%	9902	JX069762.1
58Select seq JX069761.1	Cloning vector pFosill-1, complete sequence	Cloning vector pFosill-1	NA	1206907	71.3	71.3	89%	5e-08	85.33%	9905	JX069761.1
59Select seq OY652159.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	69.4	69.4	59%	2e-07	91.84%	29841	OY652159.1
60Select seq LR994533.1	Human gammaherpesvirus 4 genome assembly, plasmid: 1	human gammaherpesvirus 4	Epstein-Barr virus	10376	69.4	69.4	70%	2e-07	88.33%	162927	LR994533.1
61Select seq OV196492.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	69.4	69.4	66%	2e-07	89.29%	30243	OV196492.1
62Select seq OV196022.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	69.4	129	63%	2e-07	90.74%	30562	OV196022.1
63Select seq OZ008436.1	Apocryptovirus menelaus Segment 2, partial CDS	Narnavirus sp.	NA	2587225	67.6	129	58%	6e-07	91.67%	1126	OZ008436.1
64Select seq OY697624.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	67.6	67.6	66%	6e-07	89.09%	29863	OY697624.1
65Select seq OY630371.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	67.6	67.6	58%	6e-07	91.67%	29839	OY630371.1
66Select seq OY271421.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	67.6	67.6	43%	6e-07	100.00%	29815	OY271421.1
67Select seq MK178599.1	Cloning vector pSAS31_redac, complete sequence	Cloning vector pSAS31_redac	NA	2562133	65.8	65.8	42%	2e-06	100.00%	6973	MK178599.1
68Select seq OY628901.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	65.8	65.8	42%	2e-06	100.00%	29833	OY628901.1
69Select seq OY698248.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	65.8	65.8	42%	2e-06	100.00%	29820	OY698248.1
70Select seq OY688032.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	65.8	65.8	64%	2e-06	89.09%	29838	OY688032.1
71Select seq OY680574.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	65.8	65.8	64%	2e-06	89.09%	29863	OY680574.1
72Select seq OY676332.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	65.8	65.8	67%	2e-06	87.72%	29828	OY676332.1
73Select seq MT232426.1	MAG: Human respirovirus 1 isolate 2019AZ, complete genome	Human respirovirus 1	NA	12730	63.9	63.9	41%	8e-06	100.00%	15554	MT232426.1
74Select seq MG188316.1	Cloning vector pCA-DEST2430, complete sequence	Cloning vector pCA-DEST2430	NA	2081765	63.9	63.9	41%	8e-06	100.00%	9335	MG188316.1
75Select seq MG188315.1	Cloning vector pCA-DEST2420, complete sequence	Cloning vector pCA-DEST2420	NA	2081764	63.9	63.9	41%	8e-06	100.00%	9516	MG188315.1
76Select seq MG188314.1	Cloning vector pCA-DEST2410, complete sequence	Cloning vector pCA-DEST2410	NA	2081763	63.9	63.9	41%	8e-06	100.00%	8870	MG188314.1
77Select seq MG188313.1	Cloning vector pCA-DEST2403, complete sequence	Cloning vector pCA-DEST2403	NA	2081762	63.9	63.9	41%	8e-06	100.00%	9320	MG188313.1
78Select seq MG188312.1	Cloning vector pCA-DEST2402, complete sequence	Cloning vector pCA-DEST2402	NA	2081761	63.9	63.9	41%	8e-06	100.00%	9515	MG188312.1
79Select seq MG188311.1	Cloning vector pCA-DEST2401, complete sequence	Cloning vector pCA-DEST2401	NA	2081760	63.9	63.9	41%	8e-06	100.00%	8870	MG188311.1
80Select seq MG188310.1	Cloning vector pCA-DEST2400, complete sequence	Cloning vector pCA-DEST2400	NA	2081759	63.9	63.9	41%	8e-06	100.00%	8870	MG188310.1
81Select seq MG188309.1	Cloning vector pCA-DEST2330, complete sequence	Cloning vector pCA-DEST2330	NA	2081758	63.9	63.9	41%	8e-06	100.00%	9130	MG188309.1
82Select seq MG188308.1	Cloning vector pCA-DEST2320, complete sequence	Cloning vector pCA-DEST2320	NA	2081757	63.9	63.9	41%	8e-06	100.00%	9311	MG188308.1
83Select seq MG188307.1	Cloning vector pCA-DEST2310, complete sequence	Cloning vector pCA-DEST2310	NA	2081756	63.9	63.9	41%	8e-06	100.00%	8677	MG188307.1
84Select seq MG188305.1	Cloning vector pCA-DEST2302, complete sequence	Cloning vector pCA-DEST2302	NA	2081754	63.9	63.9	41%	8e-06	100.00%	9308	MG188305.1
85Select seq MG188306.1	Cloning vector pCA-DEST2303, complete sequence	Cloning vector pCA-DEST2303	NA	2081755	63.9	63.9	41%	8e-06	100.00%	9113	MG188306.1
86Select seq MG188303.1	Cloning vector pCA-DEST2300, complete sequence	Cloning vector pCA-DEST2300	NA	2081752	63.9	63.9	41%	8e-06	100.00%	8575	MG188303.1
87Select seq MG188304.1	Cloning vector pCA-DEST2301, complete sequence	Cloning vector pCA-DEST2301	NA	2081753	63.9	63.9	41%	8e-06	100.00%	8663	MG188304.1
88Select seq MG188302.1	Cloning vector pCA-DEST2230, complete sequence	Cloning vector pCA-DEST2230	NA	2081751	63.9	63.9	41%	8e-06	100.00%	9412	MG188302.1
89Select seq MG188301.1	Cloning vector pCA-DEST2220, complete sequence	Cloning vector pCA-DEST2220	NA	2081750	63.9	63.9	41%	8e-06	100.00%	9550	MG188301.1
90Select seq MG188300.1	Cloning vector pCA-DEST2210, complete sequence	Cloning vector pCA-DEST2210	NA	2081749	63.9	63.9	41%	8e-06	100.00%	8947	MG188300.1
91Select seq MG188299.1	Cloning vector pCA-DEST2203, complete sequence	Cloning vector pCA-DEST2203	NA	2081748	63.9	63.9	41%	8e-06	100.00%	9355	MG188299.1
92Select seq MG188298.1	Cloning vector pCA-DEST2202, complete sequence	Cloning vector pCA-DEST2202	NA	2081747	63.9	63.9	41%	8e-06	100.00%	9550	MG188298.1
93Select seq MG188297.1	Cloning vector pCA-DEST2201, complete sequence	Cloning vector pCA-DEST2201	NA	2081746	63.9	63.9	41%	8e-06	100.00%	8905	MG188297.1
94Select seq OY629072.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	63.9	63.9	45%	8e-06	97.30%	29836	OY629072.1
95Select seq OY679872.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	63.9	63.9	41%	8e-06	100.00%	29830	OY679872.1
96Select seq OY695939.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	63.9	63.9	45%	8e-06	97.37%	29845	OY695939.1
97Select seq OY695365.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	63.9	63.9	41%	8e-06	100.00%	29803	OY695365.1
98Select seq OY658535.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	Severe acute respiratory syndrome coronavirus 2	NA	2697049	63.9	63.9	45%	8e-06	97.30%	29842	OY658535.1
99Select seq OV196000.1	Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	Severe acute respiratory syndrome coronavirus 2	NA	2697049	63.9	63.9	41%	8e-06	100.00%	30106	OV196000.1
100Select seq LC580285.1	Synthliboramphus antiquus AM16-17 DNA, microsatellite: Sa54	Synthliboramphus antiquus	ancient murrelet	28708	63.9	63.9	41%	8e-06	100.00%	251	LC580285.1

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  The graphic is an overview of the database sequences aligned to the query sequence. These are represented horizontal bars colored coded by score and showing the extent of the alignment on the query sequence. Separate aligned regions on the same database sequence are connected by a thin grey line. Mousing over an alignment shows the database sequence title. Clicking an alignment displays a box with more details about the alignment and link to the sequence alignment itself in the Alignments section of the report.
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Distribution of the top 147 Blast Hits on 100 subject sequences

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  Alignment view: Choose how to view alignments. The default "pairwise" view shows how each subject sequence aligns individually to the query sequence. The "query-anchored" view shows how all subject sequences align to the query sequence. For each view type, you can choose to show "identities" (matching residues) as letters or dots. more...
  
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Loading alignment... for sequences gi|2022611859,gi|1893169343,gi|2022611854,gi|2222028449,gi|2165835030 Reading indexes 1-5

Download GenBank Graphics Next Previous Descriptions

Synthliboramphus antiquus AM16-17 DNA, microsatellite: Sa77
Sequence ID: LC580288.1Length: 251Number of Matches: 1

Related Information

Range 1: 167 to 237GenBank Graphics Next Match Previous Match First Match

Alignment statistics for match #1
Score Expect Identities Gaps Strand Frame

132 bits(71) 2e-26() 71/71(100%) 0/71(0%) Plus/Minus

Features:

Query 13 TAATGATACGGCGACCACCGAGATCTACACAGGCGAAGACACTCTTTCCCTACACGACGC 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 237 TAATGATACGGCGACCACCGAGATCTACACAGGCGAAGACACTCTTTCCCTACACGACGC 178 Query 73 TCTTCCGATCT 83 ||||||||||| Sbjct 177 TCTTCCGATCT 167

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Human alphaherpesvirus 2, partial genome
Sequence ID: MT364888.1Length: 154695Number of Matches: 1

Related Information

Range 1: 9 to 79GenBank Graphics Next Match Previous Match First Match

Alignment statistics for match #1
Score Expect Identities Gaps Strand Frame

132 bits(71) 2e-26() 71/71(100%) 0/71(0%) Plus/Plus

Features:

Query 13 TAATGATACGGCGACCACCGAGATCTACACAGGCGAAGACACTCTTTCCCTACACGACGC 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9 TAATGATACGGCGACCACCGAGATCTACACAGGCGAAGACACTCTTTCCCTACACGACGC 68 Query 73 TCTTCCGATCT 83 ||||||||||| Sbjct 69 TCTTCCGATCT 79

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Synthliboramphus antiquus AM16-17 DNA, microsatellite: Sa23
Sequence ID: LC580283.1Length: 251Number of Matches: 1

Related Information

Range 1: 183 to 251GenBank Graphics Next Match Previous Match First Match

Alignment statistics for match #1
Score Expect Identities Gaps Strand Frame

117 bits(63) 6e-22() 67/69(97%) 0/69(0%) Plus/Minus

Features:

Query 15 ATGATACGGCGACCACCGAGATCTACACAGGCGAAGACACTCTTTCCCTACACGACGCTC 74 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 251 ATGATCCGGCGCCCACCGAGATCTACACAGGCGAAGACACTCTTTCCCTACACGACGCTC 192 Query 75 TTCCGATCT 83 ||||||||| Sbjct 191 TTCCGATCT 183

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Helicobacter pylori strain Hpfe077 chromosome, complete genome
Sequence ID: CP094103.1Length: 1624315Number of Matches: 1

Related Information

Range 1: 1292584 to 1292653GenBank Graphics Next Match Previous Match First Match

Alignment statistics for match #1
Score Expect Identities Gaps Strand Frame

108 bits(58) 3e-19() 67/71(94%) 2/71(2%) Plus/Minus

Features:

Query 14 AATGATACGGCGACCACCGAGATCTACAC-AGGCGAAGACACTCTTTCCCTACACGACGC 72 ||||||||||||||||||||||||||||| ||| | | |||||||||||||||||||||| Sbjct 1292653 AATGATACGGCGACCACCGAGATCTACACCAGGAG-ATACACTCTTTCCCTACACGACGC 1292595 Query 73 TCTTCCGATCT 83 ||||||||||| Sbjct 1292594 TCTTCCGATCT 1292584

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Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1
Sequence ID: OV196298.1Length: 30559Number of Matches: 2

Related Information

Range 1: 81 to 150GenBank Graphics Next Match Previous Match First Match

Alignment statistics for match #1
Score Expect Identities Gaps Strand Frame

108 bits(58) 3e-19() 67/71(94%) 2/71(2%) Plus/Plus

Features:

Query 13 TAATGATACGGCGACCACCGAGATCTACAC-AGGCGAAGACACTCTTTCCCTACACGACG 71 |||||||||||||||||||||||||||||| | || || ||||||||||||||||||||| Sbjct 81 TAATGATACGGCGACCACCGAGATCTACACCACGC-AATACACTCTTTCCCTACACGACG 139 Query 72 CTCTTCCGATC 82 ||||||||||| Sbjct 140 CTCTTCCGATC 150

Range 2: 30161 to 30193GenBank Graphics Next Match Previous Match First Match

Alignment statistics for match #2
Score Expect Identities Gaps Strand Frame

62.1 bits(33) 3e-05() 33/33(100%) 0/33(0%) Plus/Minus

Features:

Query 51 ACACTCTTTCCCTACACGACGCTCTTCCGATCT 83 ||||||||||||||||||||||||||||||||| Sbjct 30193 ACACTCTTTCCCTACACGACGCTCTTCCGATCT 30161
Loading alignment... for sequences gi|2837940507,gi|2583824285,gi|2319067183,gi|2165836885,gi|2165836832 Reading indexes 6-10

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Escherichia phage HMD-P3, complete genome
Sequence ID: PQ462667.1Length: 109002Number of Matches: 2

Related Information

Range 1: 7535 to 7605GenBank Graphics Next Match Previous Match First Match

Alignment statistics for match #1
Score Expect Identities Gaps Strand Frame

104 bits(56) 4e-18() 67/72(93%) 2/72(2%) Plus/Plus

Features:

Query 13 TAATGATACGGCGACCACCGAGATCTACAC-AGGCGAAGACACTCTTTCCCTACACGACG 71 |||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| Sbjct 7535 TAATGATACGGCGACCACCGAGATCTACACCTGAGGAA-ACACTCTTTCCCTACACGACG 7593 Query 72 CTCTTCCGATCT 83 |||||||||||| Sbjct 7594 CTCTTCCGATCT 7605

Range 2: 81393 to 81463GenBank Graphics Next Match Previous Match First Match

Alignment statistics for match #2
Score Expect Identities Gaps Strand Frame

104 bits(56) 4e-18() 67/72(93%) 2/72(2%) Plus/Plus

Features:

Query 13 TAATGATACGGCGACCACCGAGATCTACAC-AGGCGAAGACACTCTTTCCCTACACGACG 71 |||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| Sbjct 81393 TAATGATACGGCGACCACCGAGATCTACACCTGAGGAA-ACACTCTTTCCCTACACGACG 81451 Query 72 CTCTTCCGATCT 83 |||||||||||| Sbjct 81452 CTCTTCCGATCT 81463

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Enterococcus phage SSMH01, complete genome
Sequence ID: OR360270.1Length: 41704Number of Matches: 2

Related Information

Range 1: 41599 to 41669GenBank Graphics Next Match Previous Match First Match

Alignment statistics for match #1
Score Expect Identities Gaps Strand Frame

104 bits(56) 4e-18() 67/72(93%) 2/72(2%) Plus/Minus

Features:

Query 13 TAATGATACGGCGACCACCGAGATCTACAC-AGGCGAAGACACTCTTTCCCTACACGACG 71 |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||| Sbjct 41669 TAATGATACGGCGACCACCGAGATCTACACCTTGTG-AGACACTCTTTCCCTACACGACG 41611 Query 72 CTCTTCCGATCT 83 |||||||||||| Sbjct 41610 CTCTTCCGATCT 41599

Range 2: 1 to 32GenBank Graphics Next Match Previous Match First Match

Alignment statistics for match #2
Score Expect Identities Gaps Strand Frame

60.2 bits(32) 1e-04() 32/32(100%) 0/32(0%) Plus/Plus

Features:

Query 52 CACTCTTTCCCTACACGACGCTCTTCCGATCT 83 |||||||||||||||||||||||||||||||| Sbjct 1 CACTCTTTCCCTACACGACGCTCTTCCGATCT 32

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Yersinia enterocolitica strain Gp200 chromosome
Sequence ID: CP107088.1Length: 4530554Number of Matches: 1

Related Information

Range 1: 608453 to 608523GenBank Graphics Next Match Previous Match First Match

Alignment statistics for match #1
Score Expect Identities Gaps Strand Frame

104 bits(56) 4e-18() 67/72(93%) 2/72(2%) Plus/Plus

Features:

Query 13 TAATGATACGGCGACCACCGAGATCTACACAGGCGAAG-ACACTCTTTCCCTACACGACG 71 |||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||| Sbjct 608453 TAATGATACGGCGACCACCGAGATCTACAC-GGCTCTGAACACTCTTTCCCTACACGACG 608511 Query 72 CTCTTCCGATCT 83 |||||||||||| Sbjct 608512 CTCTTCCGATCT 608523

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Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1
Sequence ID: OV197189.1Length: 30094Number of Matches: 1

Related Information

Range 1: 29911 to 29981GenBank Graphics Next Match Previous Match First Match

Alignment statistics for match #1
Score Expect Identities Gaps Strand Frame

104 bits(56) 4e-18() 68/73(93%) 4/73(5%) Plus/Minus

Features:

Query 13 TAATGATACGGCGACCACCGAGATCTACACAGGCGAAG--ACACTCTTTCCCTACACGAC 70 |||||||||||||||||||||||||||||| | |||| |||||||||||||||||||| Sbjct 29981 TAATGATACGGCGACCACCGAGATCTACAC-TG-GAAGCAACACTCTTTCCCTACACGAC 29924 Query 71 GCTCTTCCGATCT 83 ||||||||||||| Sbjct 29923 GCTCTTCCGATCT 29911

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Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1
Sequence ID: OV197136.1Length: 30102Number of Matches: 1

Related Information

Range 1: 29913 to 29983GenBank Graphics Next Match Previous Match First Match

Alignment statistics for match #1
Score Expect Identities Gaps Strand Frame

104 bits(56) 4e-18() 66/71(93%) 0/71(0%) Plus/Minus

Features:

Query 13 TAATGATACGGCGACCACCGAGATCTACACAGGCGAAGACACTCTTTCCCTACACGACGC 72 |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct 29983 TAATGATACGGCGACCACCGAGATCTACACCGGCATTAACACTCTTTCCCTACACGACGC 29924 Query 73 TCTTCCGATCT 83 ||||||||||| Sbjct 29923 TCTTCCGATCT 29913

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
132 bits(71)	2e-26()	71/71(100%)	0/71(0%)	Plus/Minus

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
132 bits(71)	2e-26()	71/71(100%)	0/71(0%)	Plus/Plus

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
117 bits(63)	6e-22()	67/69(97%)	0/69(0%)	Plus/Minus

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
108 bits(58)	3e-19()	67/71(94%)	2/71(2%)	Plus/Minus

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
108 bits(58)	3e-19()	67/71(94%)	2/71(2%)	Plus/Plus

Alignment statistics for match #2
Score	Expect	Identities	Gaps	Strand	Frame
62.1 bits(33)	3e-05()	33/33(100%)	0/33(0%)	Plus/Minus

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
104 bits(56)	4e-18()	67/72(93%)	2/72(2%)	Plus/Plus

Alignment statistics for match #2
Score	Expect	Identities	Gaps	Strand	Frame
104 bits(56)	4e-18()	67/72(93%)	2/72(2%)	Plus/Plus

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
104 bits(56)	4e-18()	67/72(93%)	2/72(2%)	Plus/Minus

Alignment statistics for match #2
Score	Expect	Identities	Gaps	Strand	Frame
60.2 bits(32)	1e-04()	32/32(100%)	0/32(0%)	Plus/Plus

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
104 bits(56)	4e-18()	67/72(93%)	2/72(2%)	Plus/Plus

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
104 bits(56)	4e-18()	68/73(93%)	4/73(5%)	Plus/Minus

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
104 bits(56)	4e-18()	66/71(93%)	0/71(0%)	Plus/Minus

Taxonomy

100 sequences selected
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Lineage

Lineage Report
Organism	Blast Name	Score	Number of Hits	Description
root			100
.cellular organisms			10
..Eukaryota	eukaryotes		6
...Synthliboramphus antiquus	birds	132	3	Synthliboramphus antiquus hits
...Asarum shuttleworthii	flowering plants	93.5	1	Asarum shuttleworthii hits
...Asarum satsumense	flowering plants	93.5	1	Asarum satsumense hits
...Lasthenia californica	eudicots	91.6	1	Lasthenia californica hits
..Helicobacter pylori	e-proteobacteria	108	2	Helicobacter pylori hits
..Yersinia enterocolitica	enterobacteria	104	1	Yersinia enterocolitica hits
..Pseudomonas tolaasii	g-proteobacteria	78.7	1	Pseudomonas tolaasii hits
.Human alphaherpesvirus 2	viruses	132	1	Human alphaherpesvirus 2 hits
.Severe acute respiratory syndrome coronavirus 2	viruses	108	56	Severe acute respiratory syndrome coronavirus 2 hits
.Escherichia phage HMD-P3	viruses	104	1	Escherichia phage HMD-P3 hits
.Enterococcus phage SSMH01	viruses	104	1	Enterococcus phage SSMH01 hits
.Klebsiella phage phiKp_23	viruses	91.6	1	Klebsiella phage phiKp_23 hits
.Salmonella phage CHRF_10034	viruses	89.8	1	Salmonella phage CHRF_10034 hits
.Salmonella phage CHRF_10023.1	viruses	84.2	1	Salmonella phage CHRF_10023.1 hits
.human gammaherpesvirus 4	viruses	73.1	2	human gammaherpesvirus 4 hits
.Klebsiella pneumoniae phage	viruses	73.1	1	Klebsiella pneumoniae phage hits
.Cloning vector pFosill-2	other sequences	71.3	1	Cloning vector pFosill-2 hits
.Cloning vector pFosill-1	other sequences	71.3	1	Cloning vector pFosill-1 hits
.Narnavirus sp.	viruses	67.6	1	Narnavirus sp. hits
.Cloning vector pSAS31_redac	other sequences	65.8	1	Cloning vector pSAS31_redac hits
.Human respirovirus 1	viruses	63.9	1	Human respirovirus 1 hits
.Cloning vector pCA-DEST2430	other sequences	63.9	1	Cloning vector pCA-DEST2430 hits
.Cloning vector pCA-DEST2420	other sequences	63.9	1	Cloning vector pCA-DEST2420 hits
.Cloning vector pCA-DEST2410	other sequences	63.9	1	Cloning vector pCA-DEST2410 hits
.Cloning vector pCA-DEST2403	other sequences	63.9	1	Cloning vector pCA-DEST2403 hits
.Cloning vector pCA-DEST2402	other sequences	63.9	1	Cloning vector pCA-DEST2402 hits
.Cloning vector pCA-DEST2401	other sequences	63.9	1	Cloning vector pCA-DEST2401 hits
.Cloning vector pCA-DEST2400	other sequences	63.9	1	Cloning vector pCA-DEST2400 hits
.Cloning vector pCA-DEST2330	other sequences	63.9	1	Cloning vector pCA-DEST2330 hits
.Cloning vector pCA-DEST2320	other sequences	63.9	1	Cloning vector pCA-DEST2320 hits
.Cloning vector pCA-DEST2310	other sequences	63.9	1	Cloning vector pCA-DEST2310 hits
.Cloning vector pCA-DEST2302	other sequences	63.9	1	Cloning vector pCA-DEST2302 hits
.Cloning vector pCA-DEST2303	other sequences	63.9	1	Cloning vector pCA-DEST2303 hits
.Cloning vector pCA-DEST2300	other sequences	63.9	1	Cloning vector pCA-DEST2300 hits
.Cloning vector pCA-DEST2301	other sequences	63.9	1	Cloning vector pCA-DEST2301 hits
.Cloning vector pCA-DEST2230	other sequences	63.9	1	Cloning vector pCA-DEST2230 hits
.Cloning vector pCA-DEST2220	other sequences	63.9	1	Cloning vector pCA-DEST2220 hits
.Cloning vector pCA-DEST2210	other sequences	63.9	1	Cloning vector pCA-DEST2210 hits
.Cloning vector pCA-DEST2203	other sequences	63.9	1	Cloning vector pCA-DEST2203 hits
.Cloning vector pCA-DEST2202	other sequences	63.9	1	Cloning vector pCA-DEST2202 hits
.Cloning vector pCA-DEST2201	other sequences	63.9	1	Cloning vector pCA-DEST2201 hits

Organism

Organism Report
Description	Score	E value	Accession
Synthliboramphus antiquus (ancient murrelet) [birds] Next Previous First
Synthliboramphus antiquus AM16-17 DNA, microsatellite: Sa77	132	2e-26	LC580288
Synthliboramphus antiquus AM16-17 DNA, microsatellite: Sa23	117	6e-22	LC580283
Synthliboramphus antiquus AM16-17 DNA, microsatellite: Sa54	63.9	8e-06	LC580285
Human alphaherpesvirus 2 [viruses] Next Previous First
Human alphaherpesvirus 2, partial genome	132	2e-26	MT364888
Helicobacter pylori [e-proteobacteria] Next Previous First
Helicobacter pylori strain Hpfe077 chromosome, complete genome	108	3e-19	CP094103
Helicobacter pylori strain Hpfe073 chromosome, complete genome	97.1	7e-16	CP094108
Severe acute respiratory syndrome coronavirus 2 [viruses] Next Previous First
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	108	3e-19	OV196298
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	104	4e-18	OV197189
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	104	4e-18	OV197136
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	104	4e-18	OV196488
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	104	4e-18	OV196275
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	104	4e-18	OV195924
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	104	4e-18	OV195900
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	99.0	2e-16	OV197539
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	99.0	2e-16	OV196499
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	99.0	2e-16	OV195202
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	99.0	2e-16	OV195277
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	95.3	3e-15	OV016109
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	93.5	1e-14	OV197600
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	91.6	3e-14	OY637058
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	91.6	3e-14	OV197487
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	91.6	3e-14	OV196273
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	86.1	2e-12	OV196890
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	84.2	6e-12	OY636195
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	84.2	6e-12	OY654433
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	84.2	6e-12	OV197187
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	82.4	2e-11	OY635503
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	80.5	7e-11	OY636767
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	80.5	7e-11	OY702405
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	80.5	7e-11	OY650818
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	80.5	7e-11	OV195597
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	78.7	3e-10	OY712705
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	78.7	3e-10	OV377772
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	76.8	1e-09	OY632263
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	76.8	1e-09	OY697486
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	76.8	1e-09	OY629456
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	76.8	1e-09	OU471411
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	75.0	3e-09	OY700800
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	75.0	3e-09	OY712376
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	75.0	3e-09	OY676908
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	73.1	1e-08	OY694998
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	73.1	1e-08	OV196177
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	73.1	1e-08	OV196096
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	71.3	5e-08	OY635760
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	71.3	5e-08	OY672891
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	69.4	2e-07	OY652159
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	69.4	2e-07	OV196492
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	69.4	2e-07	OV196022
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	67.6	6e-07	OY697624
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	67.6	6e-07	OY630371
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	67.6	6e-07	OY271421
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	65.8	2e-06	OY628901
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	65.8	2e-06	OY698248
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	65.8	2e-06	OY688032
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	65.8	2e-06	OY680574
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	65.8	2e-06	OY676332
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	63.9	8e-06	OY629072
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	63.9	8e-06	OY679872
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	63.9	8e-06	OY695939
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	63.9	8e-06	OY695365
Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite	63.9	8e-06	OY658535
Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1	63.9	8e-06	OV196000
Escherichia phage HMD-P3 [viruses] Next Previous First
Escherichia phage HMD-P3, complete genome	104	4e-18	PQ462667
Enterococcus phage SSMH01 [viruses] Next Previous First
Enterococcus phage SSMH01, complete genome	104	4e-18	OR360270
Yersinia enterocolitica [enterobacteria] Next Previous First
Yersinia enterocolitica strain Gp200 chromosome	104	4e-18	CP107088
Asarum shuttleworthii [flowering plants] Next Previous First
Asarum shuttleworthii chloroplast DNA, nearly complete sequence	93.5	1e-14	LC529902
Asarum satsumense [flowering plants] Next Previous First
Asarum satsumense chloroplast DNA, nearly complete sequence	93.5	1e-14	LC529901
Lasthenia californica [eudicots] Next Previous First
Lasthenia californica chloroplast	91.6	3e-14	KY965816
Klebsiella phage phiKp_23 [viruses] Next Previous First
Klebsiella phage phiKp_23 DNA, sequence_id:phiKp_23-1, partial sequence	91.6	3e-14	LC768493
Salmonella phage CHRF_10034 [viruses] Next Previous First
Salmonella phage CHRF_10034, partial genome	89.8	1e-13	PQ336906
Salmonella phage CHRF_10023.1 [viruses] Next Previous First
Salmonella phage CHRF_10023.1, partial genome	84.2	6e-12	PQ336902
Pseudomonas tolaasii [g-proteobacteria] Next Previous First
Pseudomonas tolaasii strain 2192T chromosome	78.7	3e-10	CP020369
human gammaherpesvirus 4 (Epstein-Barr virus) [viruses] Next Previous First
Human gammaherpesvirus 4 isolate Necker-6, partial genome	73.1	1e-08	MT648647
Human gammaherpesvirus 4 genome assembly, plasmid: 1	69.4	2e-07	LR994533
Klebsiella pneumoniae phage [viruses] Next Previous First
Klebsiella pneumoniae phage strain 5899STDY8049230 genome assembly, chromosome: 1	73.1	1e-08	OU509537
Cloning vector pFosill-2 [other sequences] Next Previous First
Cloning vector pFosill-2, complete sequence	71.3	5e-08	JX069762
Cloning vector pFosill-1 [other sequences] Next Previous First
Cloning vector pFosill-1, complete sequence	71.3	5e-08	JX069761
Narnavirus sp. [viruses] Next Previous First
Apocryptovirus menelaus Segment 2, partial CDS	67.6	6e-07	OZ008436
Cloning vector pSAS31_redac [other sequences] Next Previous First
Cloning vector pSAS31_redac, complete sequence	65.8	2e-06	MK178599
Human respirovirus 1 [viruses] Next Previous First
MAG: Human respirovirus 1 isolate 2019AZ, complete genome	63.9	8e-06	MT232426
Cloning vector pCA-DEST2430 [other sequences] Next Previous First
Cloning vector pCA-DEST2430, complete sequence	63.9	8e-06	MG188316
Cloning vector pCA-DEST2420 [other sequences] Next Previous First
Cloning vector pCA-DEST2420, complete sequence	63.9	8e-06	MG188315
Cloning vector pCA-DEST2410 [other sequences] Next Previous First
Cloning vector pCA-DEST2410, complete sequence	63.9	8e-06	MG188314
Cloning vector pCA-DEST2403 [other sequences] Next Previous First
Cloning vector pCA-DEST2403, complete sequence	63.9	8e-06	MG188313
Cloning vector pCA-DEST2402 [other sequences] Next Previous First
Cloning vector pCA-DEST2402, complete sequence	63.9	8e-06	MG188312
Cloning vector pCA-DEST2401 [other sequences] Next Previous First
Cloning vector pCA-DEST2401, complete sequence	63.9	8e-06	MG188311
Cloning vector pCA-DEST2400 [other sequences] Next Previous First
Cloning vector pCA-DEST2400, complete sequence	63.9	8e-06	MG188310
Cloning vector pCA-DEST2330 [other sequences] Next Previous First
Cloning vector pCA-DEST2330, complete sequence	63.9	8e-06	MG188309
Cloning vector pCA-DEST2320 [other sequences] Next Previous First
Cloning vector pCA-DEST2320, complete sequence	63.9	8e-06	MG188308
Cloning vector pCA-DEST2310 [other sequences] Next Previous First
Cloning vector pCA-DEST2310, complete sequence	63.9	8e-06	MG188307
Cloning vector pCA-DEST2302 [other sequences] Next Previous First
Cloning vector pCA-DEST2302, complete sequence	63.9	8e-06	MG188305
Cloning vector pCA-DEST2303 [other sequences] Next Previous First
Cloning vector pCA-DEST2303, complete sequence	63.9	8e-06	MG188306
Cloning vector pCA-DEST2300 [other sequences] Next Previous First
Cloning vector pCA-DEST2300, complete sequence	63.9	8e-06	MG188303
Cloning vector pCA-DEST2301 [other sequences] Next Previous First
Cloning vector pCA-DEST2301, complete sequence	63.9	8e-06	MG188304
Cloning vector pCA-DEST2230 [other sequences] Next Previous First
Cloning vector pCA-DEST2230, complete sequence	63.9	8e-06	MG188302
Cloning vector pCA-DEST2220 [other sequences] Next Previous First
Cloning vector pCA-DEST2220, complete sequence	63.9	8e-06	MG188301
Cloning vector pCA-DEST2210 [other sequences] Next Previous First
Cloning vector pCA-DEST2210, complete sequence	63.9	8e-06	MG188300
Cloning vector pCA-DEST2203 [other sequences] Next Previous First
Cloning vector pCA-DEST2203, complete sequence	63.9	8e-06	MG188299
Cloning vector pCA-DEST2202 [other sequences] Next Previous First
Cloning vector pCA-DEST2202, complete sequence	63.9	8e-06	MG188298
Cloning vector pCA-DEST2201 [other sequences] Next Previous First
Cloning vector pCA-DEST2201, complete sequence	63.9	8e-06	MG188297

Taxonomy

Taxonomy Report
Taxonomy	Number of hits	Number of Organisms	Description
root	100	41
. cellular organisms	10	7
.. Eukaryota	6	4
... Synthliboramphus antiquus	3	1	Synthliboramphus antiquus hits
... Mesangiospermae	3	3
.... Asarum	2	2
..... Asarum shuttleworthii	1	1	Asarum shuttleworthii hits
..... Asarum satsumense	1	1	Asarum satsumense hits
.... Lasthenia californica	1	1	Lasthenia californica hits
.. Pseudomonadati	4	3
... Helicobacter pylori	2	1	Helicobacter pylori hits
... Gammaproteobacteria	2	2
.... Yersinia enterocolitica	1	1	Yersinia enterocolitica hits
.... Pseudomonas tolaasii	1	1	Pseudomonas tolaasii hits
. Viruses	67	11
.. Heunggongvirae	8	7
... Orthoherpesviridae	3	2
.... Human alphaherpesvirus 2	1	1	Human alphaherpesvirus 2 hits
.... human gammaherpesvirus 4	2	1	human gammaherpesvirus 4 hits
... Caudoviricetes	5	5
.... Escherichia phage HMD-P3	1	1	Escherichia phage HMD-P3 hits
.... Enterococcus phage SSMH01	1	1	Enterococcus phage SSMH01 hits
.... Klebsiella phage phiKp_23	1	1	Klebsiella phage phiKp_23 hits
.... Macdonaldcampvirus SB28	2	2
..... Salmonella phage CHRF_10034	1	1	Salmonella phage CHRF_10034 hits
..... Salmonella phage CHRF_10023.1	1	1	Salmonella phage CHRF_10023.1 hits
.. Orthornavirae	58	3
... Severe acute respiratory syndrome coronavirus 2	56	1	Severe acute respiratory syndrome coronavirus 2 hits
... Narnavirus sp.	1	1	Narnavirus sp. hits
... Human respirovirus 1	1	1	Human respirovirus 1 hits
.. Klebsiella pneumoniae phage	1	1	Klebsiella pneumoniae phage hits
. vectors	23	23
.. Cloning vector pFosill-2	1	1	Cloning vector pFosill-2 hits
.. Cloning vector pFosill-1	1	1	Cloning vector pFosill-1 hits
.. Cloning vector pSAS31_redac	1	1	Cloning vector pSAS31_redac hits
.. Cloning vector pCA-DEST2430	1	1	Cloning vector pCA-DEST2430 hits
.. Cloning vector pCA-DEST2420	1	1	Cloning vector pCA-DEST2420 hits
.. Cloning vector pCA-DEST2410	1	1	Cloning vector pCA-DEST2410 hits
.. Cloning vector pCA-DEST2403	1	1	Cloning vector pCA-DEST2403 hits
.. Cloning vector pCA-DEST2402	1	1	Cloning vector pCA-DEST2402 hits
.. Cloning vector pCA-DEST2401	1	1	Cloning vector pCA-DEST2401 hits
.. Cloning vector pCA-DEST2400	1	1	Cloning vector pCA-DEST2400 hits
.. Cloning vector pCA-DEST2330	1	1	Cloning vector pCA-DEST2330 hits
.. Cloning vector pCA-DEST2320	1	1	Cloning vector pCA-DEST2320 hits
.. Cloning vector pCA-DEST2310	1	1	Cloning vector pCA-DEST2310 hits
.. Cloning vector pCA-DEST2302	1	1	Cloning vector pCA-DEST2302 hits
.. Cloning vector pCA-DEST2303	1	1	Cloning vector pCA-DEST2303 hits
.. Cloning vector pCA-DEST2300	1	1	Cloning vector pCA-DEST2300 hits
.. Cloning vector pCA-DEST2301	1	1	Cloning vector pCA-DEST2301 hits
.. Cloning vector pCA-DEST2230	1	1	Cloning vector pCA-DEST2230 hits
.. Cloning vector pCA-DEST2220	1	1	Cloning vector pCA-DEST2220 hits
.. Cloning vector pCA-DEST2210	1	1	Cloning vector pCA-DEST2210 hits
.. Cloning vector pCA-DEST2203	1	1	Cloning vector pCA-DEST2203 hits
.. Cloning vector pCA-DEST2202	1	1	Cloning vector pCA-DEST2202 hits
.. Cloning vector pCA-DEST2201	1	1	Cloning vector pCA-DEST2201 hits

Filter Results

Sequences producing significant alignments