- 100 sequences selected
Your search is limited to records that include: SARS-CoV-2 (taxid:2697049)
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Full Entrez Query
txid2697049 [ORGN]
- Job Title
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gb|WCZ55918.1|
- RID
- TNDS3V5U016 Search expires on 01-31 06:17 am
- Program
- BLASTP
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Program version: BLASTP 2.16.1+
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Citation
ReferenceStephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.Reference - compositional score matrix adjustmentStephen F. Altschul, John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
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Citation
- Database
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nr
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See details
Title:All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects
Molecule Type:Protein
Update date:2025/01/29
Number of sequences:861002161
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See details
- Query ID
- WCZ55918.1 WCZ55918.1
- Description
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MAG: S [Swine acute diarrhea syndrome related coronavirus] [Swine acute diarrhea syndrome related coronavirus]
- Molecule type
- amino acid
- Query Length
- 1133
- Other reports
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Distance tree of results
Multiple alignment
MSA viewer
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Reports are generated on using all sequences producing significant alignments. To generate reports on a subset of sequences, use the report links in the Descriptions tab while selecting specific sequences.
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Compare these results against the new Clustered nr database
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Clustered nr is the standard NCBI nr database clustered with each sequence within 90% identity and 90% length to other members of the cluster. Your BLAST search runs against a single representative sequence for each cluster.
The representative is used as a title for the cluster and can be used to fetch all the other members.
Clustered nr is smaller and more compact for searching. Results for a clustered nr search have more taxonomic depth than standard nr results.
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Sequences producing significant alignments
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Subject sequences can be removed or added from within the Descriptions tab and the selections will carry through to the other tabbed views. Use the formats in Download to save data for selected sequences. Manage Columns adds and subtracts data columns from the Descriptions table. Use the click outs to see the selected results in GenPept , Graphical Sequence Viewer , BLAST Tree View , COBALT multiple sequence alignment .
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- hover to see the title
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- Alignment Scores
- < 40
- 40 - 50
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- 80 - 200
- >= 200
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The graphic is an overview of the database sequences aligned to the query sequence. These are represented horizontal bars colored coded by score and showing the extent of the alignment on the query sequence. Separate aligned regions on the same database sequence are connected by a thin grey line. Mousing over an alignment shows the database sequence title. Clicking an alignment displays a box with more details about the alignment and link to the sequence alignment itself in the Alignments section of the report.
- 100 sequences selected
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To select sequences, go to the Descriptions tab
Putative conserved domains have been detected, click on the image below for detailed results.
Distribution of the top 100 Blast Hits on 100 subject sequences
Query12004006008001000 -
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- Alignment view: Choose how to view alignments. The default "pairwise" view shows how each subject sequence aligns individually to the query sequence. The "query-anchored" view shows how all subject sequences align to the query sequence. For each view type, you can choose to show "identities" (matching residues) as letters or dots. more...
- CDS feature: Show annotated coding region and translation. more...
- Line length: Number of letters to show on one line in an alignment.
- 100 sequences selected
- Help
To select sequences, go to the Descriptions tab
Loading alignment... for sequences gb|UBP74086.1|,gb|UFA74177.2|,gb|UJE24990.2|,gb|UHT24722.1|,gb|UBP71765.1| AlignDB=on Reading indexes 1-5surface glycoprotein, partial [Severe acute respiratory syndrome coronavirus 2]UBP74086.17451Alignment statistics for match #1 Score Expect Method Identities Positives Gaps Frame 343 bits(880) 2e-100() Compositional matrix adjust. 232/725(32%) 352/725(48%) 63/725(8%) Query 419 CATYTVEKVTFQGVLYESNFTFSPYYNL-LYVGSQAKYVRILD--QVYEIAPCFEASYDV 475 C + +T GVL ESN F P+ + VR ++ +I PC V Sbjct 10 CVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSV 69 Query 476 LF----RSNQSFGLLYRSFDCNHLRMS----------RFRSSLHGGIPTSLGCLFNATYA 521 + SNQ +LY+ +C + ++ R S+ T GCL A + Sbjct 70 ITPGTNTSNQ-VAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHV 128 Query 522 PNDTMVDCVNPIGGGFCADFASGVAVRRISFEKHDTTYVAPVTS----------ERYVEM 571 N +C PIG G CA + + RR + + +A S + + Sbjct 129 NNS--YECDIPIGAGICASYQTQTNSRRRARSVASQSIIAYTMSLGAENSVAYSNNSIAI 186 Query 572 PLDHQLILTEQFLQTTMPKFSINCETYICDVSKACKNLLFRYGGFCQKIESDIRGAGVLL 631 P + + +T + L +M K S++C YIC S C NLL +YG FC ++ + G V Sbjct 187 PTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQ 246 Query 632 DSDVSDLYSTIAAKTSTF-VPSTGRFNVSQFFLPKSQSSSGGYESRSAIEDFFFTKIETS 690 D + ++++ + T + G FN SQ S+ S RS IED F K+ + Sbjct 247 DKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSK-----RSFIEDLLFNKVTLA 301 Query 691 GPSFYGDYYNCKKN-AIQDLTCAQYHNGLLVIPPIMDADTIGMY-GGIAAASMTLG-VFG 747 F Y +C + A +DL CAQ NGL V+PP++ + I Y + A ++T G FG Sbjct 302 DAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFG 361 Query 748 -GQLGMITWSVAMAGRLNALGVVQNALVEDVNKLANGFNQLTASVGKLALSTSSALQAIQ 806 G I +++ MA R N +GV QN L E+ +AN FN + ST+SAL +Q Sbjct 362 AGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQ 421 Query 807 TVVNQNAAQVEALISGVTENFGAISTNFKVITQRLDKLEADVQMDRLINGRMNVLQLFVT 866 VVNQNA + L+ ++ NFGAIS+ I RLDK+EA+VQ+DRLI GR+ LQ +VT Sbjct 422 NVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVT 481 Query 867 NYKLRVAELRNTHRYVQSLINECVYAQSLRNGFCGQGLHVLSIMQNAPSGIMFFHYSLIP 926 +R AE+R + + ++ECV QS R FCG+G H++S Q+AP G++F H + +P Sbjct 482 QQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVP 541 Query 927 NNTIIVRTTPGLCESDELGSKCIVAKDGVFVSANLSYWQWSPRNVYKPVNLTFSN----- 981 T P +C K ++GVFVS N +YW + RN Y+P +T N Sbjct 542 AQEKNFTTAPAICHD----GKAHFPREGVFVS-NGTYWFVTQRNFYEPQIITTDNTFVSG 596 Query 982 ----VIAVSRGANYTTLNRTFDIPELNSTSSIDDEFLQYFQNMSSELQALKNLTA-DMSR 1036 VI + Y L PEL+ S +E +YF+N +S L +++ + S Sbjct 597 NCDVVIGIVNNTVYDPLQ-----PELD---SFKEELDKYFKNHTSPDVDLGDISGINASV 648 Query 1037 LNISAEIELINEIAYNVSNMRIEVEKFQRYVTYIKWSWWQWLLIFIALTLLAGLMLWCCL 1096 +NI EI+ +NE+A N++ I++++ +Y YIKW W+ WL L + + + C Sbjct 649 VNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIAGLIAIVMVTIMLCC 708 Query 1097 ATGCC 1101 T CC Sbjct 709 MTSCC 713surface glycoprotein, partial [Severe acute respiratory syndrome coronavirus 2]UFA74177.29461Alignment statistics for match #1 Score Expect Method Identities Positives Gaps Frame 348 bits(894) 2e-100() Compositional matrix adjust. 243/763(32%) 369/763(48%) 69/763(9%) Query 398 HFVSSGAFVCEANPQKPTVGI---CATYTVEKVTFQGVLYESNFTFSPYYNL-LYVGSQA 453 + + A VC P+K T + C + +T GVL ESN F P+ + Sbjct 189 ELLHAPATVC--GPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTT 246 Query 454 KYVRILD--QVYEIAPCFEASYDVLF----RSNQSFGLLYRSFDCNHLRMS--------- 498 VR ++ +I PC V+ SNQ +LY+ +C + ++ Sbjct 247 DAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQ-VAVLYQGVNCTEVPVAIHADQLTPT 305 Query 499 -RFRSSLHGGIPTSLGCLFNATYAPNDTMVDCVNPIGGGFCADFASGVAVRRISFEKHDT 557 R S+ T GCL A + N +C PIG G CA + + RR + Sbjct 306 WRVYSTGSNVFQTRAGCLIGAEHVNNS--YECDIPIGAGICASYQTQTNSRRRARSVASQ 363 Query 558 TYVAPVTS----------ERYVEMPLDHQLILTEQFLQTTMPKFSINCETYICDVSKACK 607 + +A S + +P + + +T + L +M K S++C YIC S C Sbjct 364 SIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECS 423 Query 608 NLLFRYGGFCQKIESDIRGAGVLLDSDVSDLYSTIAAKTSTF-VPSTGRFNVSQFFLPKS 666 NLL +YG FC ++ + G V D + ++++ + T + G FN SQ S Sbjct 424 NLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPS 483 Query 667 QSSSGGYESRSAIEDFFFTKIETSGPSFYGDYYNCKKN-AIQDLTCAQYHNGLLVIPPIM 725 + S RS IED F K+ + F Y +C + A +DL CAQ NGL V+PP++ Sbjct 484 KPSK-----RSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLL 538 Query 726 DADTIGMY-GGIAAASMTLG-VFG-GQLGMITWSVAMAGRLNALGVVQNALVEDVNKLAN 782 + I Y + A ++T G FG G I +++ MA R N +GV QN L E+ +AN Sbjct 539 TDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIAN 598 Query 783 GFNQLTASVGKLALSTSSALQAIQTVVNQNAAQVEALISGVTENFGAISTNFKVITQRLD 842 FN + ST+SAL +Q VVNQNA + L+ ++ NFGAIS+ I RLD Sbjct 599 QFNSAIGKIQDSLSSTASALGKLQNVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLD 658 Query 843 KLEADVQMDRLINGRMNVLQLFVTNYKLRVAELRNTHRYVQSLINECVYAQSLRNGFCGQ 902 K+EA+VQ+DRLI GR+ LQ +VT +R AE+R + + ++ECV QS R FCG+ Sbjct 659 KVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGK 718 Query 903 GLHVLSIMQNAPSGIMFFHYSLIPNNTIIVRTTPGLCESDELGSKCIVAKDGVFVSANLS 962 G H++S Q+AP G++F H + +P T P +C K ++GVFVS N + Sbjct 719 GYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHD----GKAHFPREGVFVS-NGT 773 Query 963 YWQWSPRNVYKPVNLTFSN---------VIAVSRGANYTTLNRTFDIPELNSTSSIDDEF 1013 +W + RN Y+P +T N VI + Y L PEL+ S +E Sbjct 774 HWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQ-----PELD---SFKEEL 825 Query 1014 LQYFQNMSSELQALKNLTA-DMSRLNISAEIELINEIAYNVSNMRIEVEKFQRYVTYIKW 1072 +YF+N +S L +++ + S +NI EI+ +NE+A N++ I++++ +Y YIKW Sbjct 826 DKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKW 885 Query 1073 SWWQWLLIFIALTLLAGLMLWCCLATGCCGACGCIAASCASCC 1115 W+ WL L + + + C T CC +C SC SCC Sbjct 886 PWYIWLGFIAGLIAIVMVTIMLCCMTSCC-SCLKGFCSCGSCC 927surface glycoprotein, partial [Severe acute respiratory syndrome coronavirus 2]UJE24990.210301Alignment statistics for match #1 Score Expect Method Identities Positives Gaps Frame 350 bits(897) 4e-100() Compositional matrix adjust. 244/764(32%) 369/764(48%) 71/764(9%) Query 398 HFVSSGAFVCEANPQKPTVGI---CATYTVEKVTFQGVLYESNFTFSPYYNL-LYVGSQA 453 + + A VC P+K T + C + +T GVL ESN F P+ + Sbjct 273 ELLHAPATVC--GPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTT 330 Query 454 KYVRILD--QVYEIAPCFEASYDVLF----RSNQSFGLLYRSFDCNHLRMS--------- 498 VR ++ +I PC V+ SNQ +LY+ +C + ++ Sbjct 331 DAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQ-VAVLYQGVNCTEVPVAIHADQLTPT 389 Query 499 -RFRSSLHGGIPTSLGCLFNATYAPNDTMVDCVNPIGGGFCADFASGVAVRRISFEKHDT 557 R S+ T GCL A + N +C PIG G CA + + RR + Sbjct 390 WRVYSTGSNVFQTRAGCLIGAEHVNNS--YECDIPIGAGICASYQTQTNSRRRARSVASQ 447 Query 558 TYVAPVTS----------ERYVEMPLDHQLILTEQFLQTTMPKFSINCETYICDVSKACK 607 + +A S + +P + + +T + L +M K S++C YIC S C Sbjct 448 SIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECS 507 Query 608 NLLFRYGGFCQKIESDIRGAGVLLDSDVSDLYSTIAAKTSTF-VPSTGRFNVSQFFLPKS 666 NLL +YG FC ++ + G V D + ++++ + T + G FN SQ S Sbjct 508 NLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPS 567 Query 667 QSSSGGYESRSAIEDFFFTKIETSGPSFYGDYYNCKKN-AIQDLTCAQYHNGLLVIPPIM 725 + S RS IED F K+ + F Y +C + A +DL CAQ NGL V+PP++ Sbjct 568 KPSK-----RSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLL 622 Query 726 DADTIGMY-GGIAAASMTLG-VFG-GQLGMITWSVAMAGRLNALGVVQNALVEDVNKLAN 782 + I Y + A ++T G FG G I +++ MA R N +GV QN L E+ +AN Sbjct 623 TDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIAN 682 Query 783 GFNQLTASVGKLALSTSSALQAIQTVVNQNAAQVEALISGVTENFGAISTNFKVITQRLD 842 FN + ST+SAL +Q VVNQNA + L+ ++ NFGAIS+ I RLD Sbjct 683 QFNSAIGKIQDSLSSTASALGKLQNVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLD 742 Query 843 KLEADVQMDRLINGRMNVLQLFVTNYKLRVAELRNTHRYVQSLINECVYAQSLRNGFCGQ 902 K+EA+VQ+DRLI GR+ LQ +VT +R AE+R + + ++ECV QS R FCG+ Sbjct 743 KVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGK 802 Query 903 GLHVLSIMQNAPSGIMFFHYSLIPNNTIIVRTTPGLCESDELGSKCIVAKDGVFVSANLS 962 G H++S Q+AP G++F H + +P T P +C K ++GVFVS N + Sbjct 803 GYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHD----GKAHFPREGVFVS-NGT 857 Query 963 YWQWSPRNVYKPVNLTFSN---------VIAVSRGANYTTLNRTFDIPELNSTSSIDDEF 1013 +W + RN Y+P +T N VI + Y L PEL+ S +E Sbjct 858 HWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQ-----PELD---SFKEEL 909 Query 1014 LQYFQNMSSELQALKNLTA-DMSRLNISAEIELINEIAYNVSNMRIEVEKFQRYVTYIKW 1072 +YF+N +S L +++ + S +NI EI+ +NE+A N++ I++++ +Y YIKW Sbjct 910 DKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKW 969 Query 1073 SWWQWLLIFIALTLLAGLMLWCCLATGCCGAC-GCIAASCASCC 1115 W+ WL L + + + C T CC GC SC SCC Sbjct 970 PWYIWLGFIAGLIAIVMVTIMLCCMTSCCSCLKGCF--SCGSCC 1011surface glycoprotein, partial [Severe acute respiratory syndrome coronavirus 2]UHT24722.110301-
See 1 more title(s)
See all Identical Proteins(IPG) surface glycoprotein, partial [Severe acute respiratory syndrome coronavirus 2]UID48720.11030
Identical Proteins-Identical proteins to UHT24722.1Alignment statistics for match #1 Score Expect Method Identities Positives Gaps Frame 349 bits(896) 5e-100() Compositional matrix adjust. 243/763(32%) 369/763(48%) 69/763(9%) Query 398 HFVSSGAFVCEANPQKPTVGI---CATYTVEKVTFQGVLYESNFTFSPYYNL-LYVGSQA 453 + + A VC P+K T + C + +T GVL ESN F P+ + Sbjct 273 ELLHAPATVC--GPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTT 330 Query 454 KYVRILD--QVYEIAPCFEASYDVLF----RSNQSFGLLYRSFDCNHLRMS--------- 498 VR ++ +I PC V+ SNQ +LY+ +C + ++ Sbjct 331 DAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQ-VAVLYQGVNCTEVPVAIHADQLTPT 389 Query 499 -RFRSSLHGGIPTSLGCLFNATYAPNDTMVDCVNPIGGGFCADFASGVAVRRISFEKHDT 557 R S+ T GCL A + N +C PIG G CA + + RR + Sbjct 390 WRVYSTGSNVFQTRAGCLIGAEHVNNS--YECDIPIGAGICASYQTQTNSRRRARSVASQ 447 Query 558 TYVAPVTS----------ERYVEMPLDHQLILTEQFLQTTMPKFSINCETYICDVSKACK 607 + +A S + +P + + +T + L +M K S++C YIC S C Sbjct 448 SIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECS 507 Query 608 NLLFRYGGFCQKIESDIRGAGVLLDSDVSDLYSTIAAKTSTF-VPSTGRFNVSQFFLPKS 666 NLL +YG FC ++ + G V D + ++++ + T + G FN SQ S Sbjct 508 NLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPS 567 Query 667 QSSSGGYESRSAIEDFFFTKIETSGPSFYGDYYNCKKN-AIQDLTCAQYHNGLLVIPPIM 725 + S RS IED F K+ + F Y +C + A +DL CAQ NGL V+PP++ Sbjct 568 KPSK-----RSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLL 622 Query 726 DADTIGMY-GGIAAASMTLG-VFG-GQLGMITWSVAMAGRLNALGVVQNALVEDVNKLAN 782 + I Y + A ++T G FG G I +++ MA R N +GV QN L E+ +AN Sbjct 623 TDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIAN 682 Query 783 GFNQLTASVGKLALSTSSALQAIQTVVNQNAAQVEALISGVTENFGAISTNFKVITQRLD 842 FN + ST+SAL +Q VVNQNA + L+ ++ NFGAIS+ I RLD Sbjct 683 QFNSAIGKIQDSLSSTASALGKLQNVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLD 742 Query 843 KLEADVQMDRLINGRMNVLQLFVTNYKLRVAELRNTHRYVQSLINECVYAQSLRNGFCGQ 902 K+EA+VQ+DRLI GR+ LQ +VT +R AE+R + + ++ECV QS R FCG+ Sbjct 743 KVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGK 802 Query 903 GLHVLSIMQNAPSGIMFFHYSLIPNNTIIVRTTPGLCESDELGSKCIVAKDGVFVSANLS 962 G H++S Q+AP G++F H + +P T P +C K ++GVFVS N + Sbjct 803 GYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHD----GKAHFPREGVFVS-NGT 857 Query 963 YWQWSPRNVYKPVNLTFSN---------VIAVSRGANYTTLNRTFDIPELNSTSSIDDEF 1013 +W + RN Y+P +T N VI + Y L PEL+ S +E Sbjct 858 HWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQ-----PELD---SFKEEL 909 Query 1014 LQYFQNMSSELQALKNLTA-DMSRLNISAEIELINEIAYNVSNMRIEVEKFQRYVTYIKW 1072 +YF+N +S L +++ + S +NI EI+ +NE+A N++ I++++ +Y YIKW Sbjct 910 DKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKW 969 Query 1073 SWWQWLLIFIALTLLAGLMLWCCLATGCCGACGCIAASCASCC 1115 W+ WL L + + + C T CC +C SC SCC Sbjct 970 PWYIWLGFIAGLIAIVMVTIMLCCMTSCC-SCLKGXCSCGSCC 1011surface glycoprotein, partial [Severe acute respiratory syndrome coronavirus 2]UBP71765.17451-
See 4 more title(s)
See all Identical Proteins(IPG) surface glycoprotein, partial [Severe acute respiratory syndrome coronavirus 2]UBP71825.1745surface glycoprotein, partial [Severe acute respiratory syndrome coronavirus 2]UBP74881.1745surface glycoprotein, partial [Severe acute respiratory syndrome coronavirus 2]UBP75360.1745surface glycoprotein, partial [Severe acute respiratory syndrome coronavirus 2]UBP75812.1745
Identical Proteins-Identical proteins to UBP71765.1Alignment statistics for match #1 Score Expect Method Identities Positives Gaps Frame 342 bits(876) 7e-100() Compositional matrix adjust. 231/725(32%) 352/725(48%) 63/725(8%) Query 419 CATYTVEKVTFQGVLYESNFTFSPYYNL-LYVGSQAKYVRILD--QVYEIAPCFEASYDV 475 C + +T GVL ESN F P+ + VR ++ +I PC V Sbjct 10 CVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSV 69 Query 476 LF----RSNQSFGLLYRSFDCNHLRMS----------RFRSSLHGGIPTSLGCLFNATYA 521 + SNQ +LY+ +C + ++ R S+ T GCL A + Sbjct 70 ITPGTNTSNQ-VAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHV 128 Query 522 PNDTMVDCVNPIGGGFCADFASGVAVRRISFEKHDTTYVAPVTS----------ERYVEM 571 N +C PIG G CA + + RR + + +A S + + Sbjct 129 NNS--YECDIPIGAGICASYQTQTNSRRRARSVASQSIIAYTMSLGAENSVAYSNNSIAI 186 Query 572 PLDHQLILTEQFLQTTMPKFSINCETYICDVSKACKNLLFRYGGFCQKIESDIRGAGVLL 631 P + + +T + L +M K S++C YIC S C NLL +YG FC ++ + G V Sbjct 187 PTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQ 246 Query 632 DSDVSDLYSTIAAKTSTF-VPSTGRFNVSQFFLPKSQSSSGGYESRSAIEDFFFTKIETS 690 D + ++++ + T + G FN SQ S+ S RS IED F K+ + Sbjct 247 DKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSK-----RSFIEDLLFNKVTLA 301 Query 691 GPSFYGDYYNCKKN-AIQDLTCAQYHNGLLVIPPIMDADTIGMY-GGIAAASMTLG-VFG 747 F Y +C + A +DL CAQ NGL V+PP++ + I Y + A ++T G FG Sbjct 302 DAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFG 361 Query 748 -GQLGMITWSVAMAGRLNALGVVQNALVEDVNKLANGFNQLTASVGKLALSTSSALQAIQ 806 G I +++ MA R N +GV QN L E+ +AN FN + ST+SAL +Q Sbjct 362 AGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQ 421 Query 807 TVVNQNAAQVEALISGVTENFGAISTNFKVITQRLDKLEADVQMDRLINGRMNVLQLFVT 866 VVNQNA + L+ ++ NFGAIS+ I RLDK+EA+VQ+DRLI GR+ LQ +VT Sbjct 422 NVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVT 481 Query 867 NYKLRVAELRNTHRYVQSLINECVYAQSLRNGFCGQGLHVLSIMQNAPSGIMFFHYSLIP 926 +R AE+R + + ++ECV QS R FCG+G H++S Q+AP G++F H + +P Sbjct 482 QQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVP 541 Query 927 NNTIIVRTTPGLCESDELGSKCIVAKDGVFVSANLSYWQWSPRNVYKPVNLTFSN----- 981 T P +C K ++GVFVS N ++W + RN Y+P +T N Sbjct 542 AQEKNFTTAPAICHD----GKAHFPREGVFVS-NGTHWFVTQRNFYEPQIITTDNTFVSG 596 Query 982 ----VIAVSRGANYTTLNRTFDIPELNSTSSIDDEFLQYFQNMSSELQALKNLTA-DMSR 1036 VI + Y L PEL+ S +E +YF+N +S L +++ + S Sbjct 597 NCDVVIGIVNNTVYDPLQ-----PELD---SFKEELDKYFKNHTSPDVDLGDISGINASV 648 Query 1037 LNISAEIELINEIAYNVSNMRIEVEKFQRYVTYIKWSWWQWLLIFIALTLLAGLMLWCCL 1096 +NI EI+ +NE+A N++ I++++ +Y YIKW W+ WL L + + + C Sbjct 649 VNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIAGLIAIVMVTIMLCC 708 Query 1097 ATGCC 1101 T CC Sbjct 709 MTSCC 713Loading alignment... for sequences gb|UGV82437.1|,gb|QYE52398.1|,gb|UFN86138.1|,gb|WAQ59771.1|,gb|USV45990.1| AlignDB=on Reading indexes 6-10surface glycoprotein, partial [Severe acute respiratory syndrome coronavirus 2]UGV82437.110301-
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See all Identical Proteins(IPG) surface glycoprotein, partial [Severe acute respiratory syndrome coronavirus 2]UHT03805.11030
Identical Proteins-Identical proteins to UGV82437.1Alignment statistics for match #1 Score Expect Method Identities Positives Gaps Frame 348 bits(894) 1e-99() Compositional matrix adjust. 243/763(32%) 369/763(48%) 69/763(9%) Query 398 HFVSSGAFVCEANPQKPTVGI---CATYTVEKVTFQGVLYESNFTFSPYYNL-LYVGSQA 453 + + A VC P+K T + C + +T GVL ESN F P+ + Sbjct 273 ELLHAPATVC--GPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTT 330 Query 454 KYVRILD--QVYEIAPCFEASYDVLF----RSNQSFGLLYRSFDCNHLRMS--------- 498 VR ++ +I PC V+ SNQ +LY+ +C + ++ Sbjct 331 DAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQ-VAVLYQGVNCTEVPVAIHADQLTPT 389 Query 499 -RFRSSLHGGIPTSLGCLFNATYAPNDTMVDCVNPIGGGFCADFASGVAVRRISFEKHDT 557 R S+ T GCL A + N +C PIG G CA + + RR + Sbjct 390 WRVYSTGSNVFQTRAGCLIGAEHVNNS--YECDIPIGAGICASYQTQTNSRRRARSVASQ 447 Query 558 TYVAPVTS----------ERYVEMPLDHQLILTEQFLQTTMPKFSINCETYICDVSKACK 607 + +A S + +P + + +T + L +M K S++C YIC S C Sbjct 448 SIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECS 507 Query 608 NLLFRYGGFCQKIESDIRGAGVLLDSDVSDLYSTIAAKTSTF-VPSTGRFNVSQFFLPKS 666 NLL +YG FC ++ + G V D + ++++ + T + G FN SQ S Sbjct 508 NLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPS 567 Query 667 QSSSGGYESRSAIEDFFFTKIETSGPSFYGDYYNCKKN-AIQDLTCAQYHNGLLVIPPIM 725 + S RS IED F K+ + F Y +C + A +DL CAQ NGL V+PP++ Sbjct 568 KPSK-----RSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLL 622 Query 726 DADTIGMY-GGIAAASMTLG-VFG-GQLGMITWSVAMAGRLNALGVVQNALVEDVNKLAN 782 + I Y + A ++T G FG G I +++ MA R N +GV QN L E+ +AN Sbjct 623 TDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIAN 682 Query 783 GFNQLTASVGKLALSTSSALQAIQTVVNQNAAQVEALISGVTENFGAISTNFKVITQRLD 842 FN + ST+SAL +Q VVNQNA + L+ ++ NFGAIS+ I RLD Sbjct 683 QFNSAIGKIQDSLSSTASALGKLQNVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLD 742 Query 843 KLEADVQMDRLINGRMNVLQLFVTNYKLRVAELRNTHRYVQSLINECVYAQSLRNGFCGQ 902 K+EA+VQ+DRLI GR+ LQ +VT +R AE+R + + ++ECV QS R FCG+ Sbjct 743 KVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGK 802 Query 903 GLHVLSIMQNAPSGIMFFHYSLIPNNTIIVRTTPGLCESDELGSKCIVAKDGVFVSANLS 962 G H++S Q+AP G++F H + +P T P +C K ++GVFVS N + Sbjct 803 GYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHD----GKAHFPREGVFVS-NGT 857 Query 963 YWQWSPRNVYKPVNLTFSN---------VIAVSRGANYTTLNRTFDIPELNSTSSIDDEF 1013 +W + RN Y+P +T N VI + Y L PEL+ S +E Sbjct 858 HWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQ-----PELD---SFKEEL 909 Query 1014 LQYFQNMSSELQALKNLTA-DMSRLNISAEIELINEIAYNVSNMRIEVEKFQRYVTYIKW 1072 +YF+N +S L +++ + S +NI EI+ +NE+A N++ I++++ +Y YIKW Sbjct 910 DKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKW 969 Query 1073 SWWQWLLIFIALTLLAGLMLWCCLATGCCGACGCIAASCASCC 1115 W+ WL L + + + C T CC +C SC SCC Sbjct 970 PWYIWLGFIAGLIAIVMVTIMLCCMTSCC-SCLKGFCSCGSCC 1011surface glycoprotein, partial [Severe acute respiratory syndrome coronavirus 2]QYE52398.17511Alignment statistics for match #1 Score Expect Method Identities Positives Gaps Frame 341 bits(875) 1e-99() Compositional matrix adjust. 231/725(32%) 352/725(48%) 63/725(8%) Query 419 CATYTVEKVTFQGVLYESNFTFSPYYNL-LYVGSQAKYVRILD--QVYEIAPCFEASYDV 475 C + +T GVL ESN F P+ + VR ++ +I PC V Sbjct 16 CVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSV 75 Query 476 LF----RSNQSFGLLYRSFDCNHLRMS----------RFRSSLHGGIPTSLGCLFNATYA 521 + SNQ +LY+ +C + ++ R S+ T GCL A + Sbjct 76 ITPGTNTSNQ-VAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHV 134 Query 522 PNDTMVDCVNPIGGGFCADFASGVAVRRISFEKHDTTYVAPVTS----------ERYVEM 571 N +C PIG G CA + + RR + + +A S + + Sbjct 135 NNS--YECDIPIGAGICASYQTQTNSRRRARSVASQSIIAYTMSLGAENSVAYSNNSIAI 192 Query 572 PLDHQLILTEQFLQTTMPKFSINCETYICDVSKACKNLLFRYGGFCQKIESDIRGAGVLL 631 P + + +T + L +M K S++C YIC S C NLL +YG FC ++ + G V Sbjct 193 PTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQ 252 Query 632 DSDVSDLYSTIAAKTSTF-VPSTGRFNVSQFFLPKSQSSSGGYESRSAIEDFFFTKIETS 690 D + ++++ + T + G FN SQ S+ S RS IED F K+ + Sbjct 253 DKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSK-----RSFIEDLLFNKVTLA 307 Query 691 GPSFYGDYYNCKKN-AIQDLTCAQYHNGLLVIPPIMDADTIGMY-GGIAAASMTLG-VFG 747 F Y +C + A +DL CAQ NGL V+PP++ + I Y + A ++T G FG Sbjct 308 DAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFG 367 Query 748 -GQLGMITWSVAMAGRLNALGVVQNALVEDVNKLANGFNQLTASVGKLALSTSSALQAIQ 806 G I +++ MA R N +GV QN L E+ +AN FN + ST+SAL +Q Sbjct 368 AGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQ 427 Query 807 TVVNQNAAQVEALISGVTENFGAISTNFKVITQRLDKLEADVQMDRLINGRMNVLQLFVT 866 VVNQNA + L+ ++ NFGAIS+ I RLDK+EA+VQ+DRLI GR+ LQ +VT Sbjct 428 NVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVT 487 Query 867 NYKLRVAELRNTHRYVQSLINECVYAQSLRNGFCGQGLHVLSIMQNAPSGIMFFHYSLIP 926 +R AE+R + + ++ECV QS R FCG+G H++S Q+AP G++F H + +P Sbjct 488 QQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVP 547 Query 927 NNTIIVRTTPGLCESDELGSKCIVAKDGVFVSANLSYWQWSPRNVYKPVNLTFSN----- 981 T P +C K ++GVFVS N ++W + RN Y+P +T N Sbjct 548 AQEKNFTTAPAICHD----GKAHFPREGVFVS-NGTHWFVTQRNFYEPQIITTDNTFVSG 602 Query 982 ----VIAVSRGANYTTLNRTFDIPELNSTSSIDDEFLQYFQNMSSELQALKNLTA-DMSR 1036 VI + Y L PEL+ S +E +YF+N +S L +++ + S Sbjct 603 NCDVVIGIVNNTVYDPLQ-----PELD---SFKEELDKYFKNHTSPDVDLGDISGINASV 654 Query 1037 LNISAEIELINEIAYNVSNMRIEVEKFQRYVTYIKWSWWQWLLIFIALTLLAGLMLWCCL 1096 +NI EI+ +NE+A N++ I++++ +Y YIKW W+ WL L + + + C Sbjct 655 VNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIAGLIAIVMVTIMLCC 714 Query 1097 ATGCC 1101 T CC Sbjct 715 MTSCC 719surface glycoprotein, partial [Severe acute respiratory syndrome coronavirus 2]UFN86138.18681Alignment statistics for match #1 Score Expect Method Identities Positives Gaps Frame 344 bits(883) 1e-99() Compositional matrix adjust. 243/777(31%) 375/777(48%) 77/777(9%) Query 376 PYECFGWSWNDPSDG--YYDWWIA----HFVSSGAFVCEANPQKPTVGI---CATYTVEK 426 P + +G+ P++G Y + + + + A VC P+K T + C + Sbjct 86 PLQSYGFQ---PTNGVGYQPYRVVVLSFELLHAPATVC--GPKKSTNLVKNKCVNFNFNG 140 Query 427 VTFQGVLYESNFTFSPYYNL-LYVGSQAKYVRILD--QVYEIAPCFEASYDVLF----RS 479 +T GVL ESN F P+ + VR ++ +I PC V+ S Sbjct 141 LTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTS 200 Query 480 NQSFGLLYRSFDCNHLRMS----------RFRSSLHGGIPTSLGCLFNATYAPNDTMVDC 529 NQ +LY+ +C + ++ R S+ T GCL A + N +C Sbjct 201 NQ-VAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNS--YEC 257 Query 530 VNPIGGGFCADFASGVAVRRISFEKHDTTYVAPVTS----------ERYVEMPLDHQLIL 579 PIG G CA + + RR + + +A S + +P + + + Sbjct 258 DIPIGAGICASYQTQTNSRRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISV 317 Query 580 TEQFLQTTMPKFSINCETYICDVSKACKNLLFRYGGFCQKIESDIRGAGVLLDSDVSDLY 639 T + L +M K S++C YIC S C NLL +YG FC ++ + G V D + +++ Sbjct 318 TTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVF 377 Query 640 STIAAKTSTF-VPSTGRFNVSQFFLPKSQSSSGGYESRSAIEDFFFTKIETSGPSFYGDY 698 + + T + G FN SQ L S+ S RS IED F K+ + F Y Sbjct 378 AQVKQIYKTPPIKDFGGFNFSQILLDPSKPSK-----RSFIEDLLFNKVTLADAGFIKQY 432 Query 699 YNCKKN-AIQDLTCAQYHNGLLVIPPIMDADTIGMY-GGIAAASMTLG-VFG-GQLGMIT 754 +C + A +DL CAQ NGL V+PP++ + I Y + A ++T G FG G I Sbjct 433 GDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIP 492 Query 755 WSVAMAGRLNALGVVQNALVEDVNKLANGFNQLTASVGKLALSTSSALQAIQTVVNQNAA 814 +++ MA R N +GV QN L E+ +AN FN + ST+SAL +Q VVNQNA Sbjct 493 FAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQNVVNQNAQ 552 Query 815 QVEALISGVTENFGAISTNFKVITQRLDKLEADVQMDRLINGRMNVLQLFVTNYKLRVAE 874 + L+ ++ NFGAIS+ I RLDK+EA+VQ+DRLI GR+ LQ +VT +R AE Sbjct 553 ALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAE 612 Query 875 LRNTHRYVQSLINECVYAQSLRNGFCGQGLHVLSIMQNAPSGIMFFHYSLIPNNTIIVRT 934 +R + + ++ECV QS R FCG+G H++S Q+AP G++F H + +P T Sbjct 613 IRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTT 672 Query 935 TPGLCESDELGSKCIVAKDGVFVSANLSYWQWSPRNVYKPVNLTFSN---------VIAV 985 P +C K ++GVFVS N ++W + RN Y+P +T N VI + Sbjct 673 APAICHD----GKAHFPREGVFVS-NGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGI 727 Query 986 SRGANYTTLNRTFDIPELNSTSSIDDEFLQYFQNMSSELQALKNLTA-DMSRLNISAEIE 1044 Y L PEL+ S +E +YF+N +S L +++ + S +NI EI+ Sbjct 728 VNNTVYDPLQ-----PELD---SFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEID 779 Query 1045 LINEIAYNVSNMRIEVEKFQRYVTYIKWSWWQWLLIFIALTLLAGLMLWCCLATGCC 1101 +NE+A N++ I++++ +Y YIKW W+ WL L + + + C T CC Sbjct 780 RLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIAGLIAIVMVTIMLCCMTSCC 836surface glycoprotein, partial [Severe acute respiratory syndrome coronavirus 2]WAQ59771.111001Alignment statistics for match #1 Score Expect Method Identities Positives Gaps Frame 350 bits(897) 1e-99() Compositional matrix adjust. 238/740(32%) 359/740(48%) 66/740(8%) Query 419 CATYTVEKVTFQGVLYESNFTFSPYYNL-LYVGSQAKYVRILD--QVYEIAPCFEASYDV 475 C + +T GVL ESN F P+ + VR ++ +I PC V Sbjct 365 CVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSV 424 Query 476 LF----RSNQSFGLLYRSFDCNHLRMS----------RFRSSLHGGIPTSLGCLFNATYA 521 + SNQ +LY+ +C + ++ R S+ T GCL A + Sbjct 425 ITPGTNTSNQ-VAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHV 483 Query 522 PNDTMVDCVNPIGGGFCADFASGVAVRRISFEKHDTTYVAPVTS----------ERYVEM 571 N +C PIG G CA + + RR + + +A S + + Sbjct 484 NNS--YECDIPIGAGICASYQTQTNSRRRARSVASQSIIAYTMSLGAENSVAYSNNSIAI 541 Query 572 PLDHQLILTEQFLQTTMPKFSINCETYICDVSKACKNLLFRYGGFCQKIESDIRGAGVLL 631 P + + +T + L +M K S++C YIC S C NLL +YG FC ++ + G V Sbjct 542 PTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQ 601 Query 632 DSDVSDLYSTIAAKTSTF-VPSTGRFNVSQFFLPKSQSSSGGYESRSAIEDFFFTKIETS 690 D + ++++ + T + G FN SQ S+ S RS IED F K+ + Sbjct 602 DKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSK-----RSFIEDLLFNKVTLA 656 Query 691 GPSFYGDYYNCKKN-AIQDLTCAQYHNGLLVIPPIMDADTIGMY-GGIAAASMTLG-VFG 747 F Y +C + A +DL CAQ NGL V+PP++ + I Y + A ++T G FG Sbjct 657 DAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFG 716 Query 748 -GQLGMITWSVAMAGRLNALGVVQNALVEDVNKLANGFNQLTASVGKLALSTSSALQAIQ 806 G I +++ MA R N +GV QN L E+ +AN FN + ST+SAL +Q Sbjct 717 AGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQ 776 Query 807 TVVNQNAAQVEALISGVTENFGAISTNFKVITQRLDKLEADVQMDRLINGRMNVLQLFVT 866 VVNQNA + L+ ++ NFGAIS+ I RLDK+EA+VQ+DRLI GR+ LQ +VT Sbjct 777 NVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVT 836 Query 867 NYKLRVAELRNTHRYVQSLINECVYAQSLRNGFCGQGLHVLSIMQNAPSGIMFFHYSLIP 926 +R AE+R + + ++ECV QS R FCG+G H++S Q+AP G++F H + +P Sbjct 837 QQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVP 896 Query 927 NNTIIVRTTPGLCESDELGSKCIVAKDGVFVSANLSYWQWSPRNVYKPVNLTFSN----- 981 T P +C K ++GVFVS N ++W + RN Y+P +T N Sbjct 897 AQEKNFTTAPAICHD----GKAHFPREGVFVS-NGTHWFLTQRNFYEPQIITTDNTFVSG 951 Query 982 ----VIAVSRGANYTTLNRTFDIPELNSTSSIDDEFLQYFQNMSSELQALKNLTA-DMSR 1036 VI + Y L PEL+ S +E +YF+N +S L +++ + S Sbjct 952 NCDVVIGIVNNTVYDPLQ-----PELD---SFKEELDKYFKNHTSPDVDLGDISGINASV 1003 Query 1037 LNISAEIELINEIAYNVSNMRIEVEKFQRYVTYIKWSWWQWLLIFIALTLLAGLMLWCCL 1096 +NI EI+ +NE+A N++ I++++ +Y YIKW W+ WL L + + + C Sbjct 1004 VNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIAGLIAIVMVTIMLCC 1063 Query 1097 ATGCCGAC-GCIAASCASCC 1115 T CC GC SC SCC Sbjct 1064 MTSCCSCLKGCF--SCGSCC 1081surface glycoprotein, partial [Severe acute respiratory syndrome coronavirus 2]USV45990.18061Alignment statistics for match #1 Score Expect Method Identities Positives Gaps Frame 343 bits(879) 1e-99() Compositional matrix adjust. 242/777(31%) 374/777(48%) 77/777(9%) Query 376 PYECFGWSWNDPSDG--YYDWWIA----HFVSSGAFVCEANPQKPTVGI---CATYTVEK 426 P + +G+ P++G Y + + + + A VC P+K T + C + Sbjct 24 PLQSYGFQ---PTNGVGYQPYRVVVLSFELLHAPATVC--GPKKSTNLVKNKCVNFNFNG 78 Query 427 VTFQGVLYESNFTFSPYYNL-LYVGSQAKYVRILD--QVYEIAPCFEASYDVLF----RS 479 +T GVL ESN F P+ + VR ++ +I PC V+ S Sbjct 79 LTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTS 138 Query 480 NQSFGLLYRSFDCNHLRMS----------RFRSSLHGGIPTSLGCLFNATYAPNDTMVDC 529 NQ +LY+ +C + ++ R S+ T GCL A + N +C Sbjct 139 NQ-VAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNS--YEC 195 Query 530 VNPIGGGFCADFASGVAVRRISFEKHDTTYVAPVTS----------ERYVEMPLDHQLIL 579 PIG G CA + + RR + + +A S + +P + + + Sbjct 196 DIPIGAGICASYQTQTNSRRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISV 255 Query 580 TEQFLQTTMPKFSINCETYICDVSKACKNLLFRYGGFCQKIESDIRGAGVLLDSDVSDLY 639 T + L +M K S++C YIC S C NLL +YG FC ++ + G V D + +++ Sbjct 256 TTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVF 315 Query 640 STIAAKTSTF-VPSTGRFNVSQFFLPKSQSSSGGYESRSAIEDFFFTKIETSGPSFYGDY 698 + + T + G FN SQ S+ S RS IED F K+ + F Y Sbjct 316 AQVKQIYKTPPIKDFGGFNFSQILPDPSKPSK-----RSFIEDLLFNKVTLADAGFIKQY 370 Query 699 YNCKKN-AIQDLTCAQYHNGLLVIPPIMDADTIGMY-GGIAAASMTLG-VFG-GQLGMIT 754 +C + A +DL CAQ NGL V+PP++ + I Y + A ++T G FG G I Sbjct 371 GDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIP 430 Query 755 WSVAMAGRLNALGVVQNALVEDVNKLANGFNQLTASVGKLALSTSSALQAIQTVVNQNAA 814 +++ MA R N +GV QN L E+ +AN FN + ST+SAL +Q VVNQNA Sbjct 431 FAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQNVVNQNAQ 490 Query 815 QVEALISGVTENFGAISTNFKVITQRLDKLEADVQMDRLINGRMNVLQLFVTNYKLRVAE 874 + L+ ++ NFGAIS+ I RLDK+EA+VQ+DRLI GR+ LQ +VT +R AE Sbjct 491 ALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAE 550 Query 875 LRNTHRYVQSLINECVYAQSLRNGFCGQGLHVLSIMQNAPSGIMFFHYSLIPNNTIIVRT 934 +R + + ++ECV QS R FCG+G H++S Q+AP G++F H + +P T Sbjct 551 IRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTT 610 Query 935 TPGLCESDELGSKCIVAKDGVFVSANLSYWQWSPRNVYKPVNLTFSN---------VIAV 985 P +C K ++GVFVS N ++W + RN Y+P +T N VI + Sbjct 611 APAICHD----GKAHFPREGVFVS-NGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGI 665 Query 986 SRGANYTTLNRTFDIPELNSTSSIDDEFLQYFQNMSSELQALKNLTA-DMSRLNISAEIE 1044 Y L PEL+ S +E +YF+N +S L +++ + S +NI EI+ Sbjct 666 VNNTVYDPLQ-----PELD---SFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEID 717 Query 1045 LINEIAYNVSNMRIEVEKFQRYVTYIKWSWWQWLLIFIALTLLAGLMLWCCLATGCC 1101 +NE+A N++ I++++ +Y YIKW W+ WL L + + + C T CC Sbjct 718 RLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIAGLIAIVMVTIMLCCMTSCC 774 -
Reports
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Lineage Report Organism Blast Name Score Number of Hits Description Severe acute respiratory syndrome coronavirus 2 viruses 343 144 -
Organism Report Description Score E value Accession Severe acute respiratory syndrome coronavirus 2 [viruses] Next Previous First 343 2e-100 UBP74086 348 2e-100 UFA74177 350 4e-100 UJE24990 349 5e-100 UHT24722 349 5e-100 UID48720 342 7e-100 UBP71765 342 7e-100 UBP71825 342 7e-100 UBP74881 342 7e-100 UBP75360 342 7e-100 UBP75812 348 1e-99 UGV82437 348 1e-99 UHT03805 341 1e-99 QYE52398 344 1e-99 UFN86138 350 1e-99 WAQ59771 343 1e-99 USV45990 348 1e-99 UBY38812 348 1e-99 UGV85057 348 1e-99 UHT06437 348 1e-99 UID54265 341 1e-99 UPZ90598 348 2e-99 UJR73829 348 2e-99 UFA91604 352 2e-99 UHK59534 343 2e-99 UGW37453 347 2e-99 ULB55910 352 2e-99 UFA28400 352 2e-99 UAL89803 343 2e-99 UGW36485 343 3e-99 UHE67677 352 3e-99 UHU05006 352 3e-99 UEO99260 352 3e-99 UEJ40175 342 3e-99 UPI42563 352 3e-99 UFC49671 349 3e-99 UHQ62074 351 3e-99 UDK43548 343 4e-99 UCV56004 351 4e-99 UBV58247 351 4e-99 UBJ39849 351 4e-99 UBV59717 351 4e-99 UBB07605 351 4e-99 UHK02189 351 4e-99 QXF28634 351 4e-99 UAL90216 351 4e-99 UAL90238 351 4e-99 USX88711 351 4e-99 UDV10579 351 4e-99 UEQ91838 351 4e-99 UHB08079 351 4e-99 QZS90088 351 4e-99 UAP74444 351 4e-99 UAV11566 351 4e-99 UBA99243 351 4e-99 UBB01695 351 4e-99 UBB07345 351 4e-99 UBP18563 351 4e-99 UCB91419 351 4e-99 UCS81083 351 4e-99 UCX66081 351 4e-99 UCX62458 351 4e-99 UJN25849 351 4e-99 QZO48402 351 4e-99 UHJ85676 351 4e-99 UCK77488 351 5e-99 UBM69203 351 5e-99 UCX85270 351 5e-99 UYM41359 351 5e-99 UBV50440 351 5e-99 UPM16173 351 5e-99 UBD46201 351 5e-99 UHP32268 351 5e-99 UBU91232 351 5e-99 UDV78950 351 5e-99 UBL17921 342 5e-99 UHE66941 351 5e-99 QYX08121 351 5e-99 UBJ78470 351 5e-99 UBJ92174 351 5e-99 UBP73556 351 5e-99 UBY08505 351 5e-99 UKG27135 351 5e-99 UGS02567 351 5e-99 QZG93879 351 5e-99 UHQ84727 351 5e-99 UIS37298 351 5e-99 QZX10058 351 5e-99 UFA29619 351 6e-99 UHQ76564 351 6e-99 UFO83985 351 6e-99 UBP70808 351 6e-99 UHQ62871 350 6e-99 UCV52794 350 6e-99 UGS94802 350 6e-99 UGT09137 350 6e-99 UGT28259 350 6e-99 UHQ90582 350 6e-99 UHQ91150 350 6e-99 UHY93886 342 6e-99 UGY63743 350 6e-99 UAN79940 350 6e-99 UHM87434 350 6e-99 UNU45459 350 6e-99 UDH18026 350 6e-99 UDA16005 350 6e-99 UAY99256 342 6e-99 UHO87509 342 6e-99 USV44958 350 6e-99 UHJ30127 350 6e-99 UHJ90480 350 6e-99 UHW29818 350 6e-99 UHW29842 350 6e-99 UHW29854 350 6e-99 UEQ63209 350 6e-99 UBZ88852 350 6e-99 UFM53730 350 6e-99 UGS05222 350 6e-99 UFV95583 350 6e-99 UHF57713 350 6e-99 UHX64113 350 6e-99 UHK02272 342 6e-99 QZQ77709 342 6e-99 UBP76633 342 6e-99 UDW24728 342 7e-99 UGN28001 350 7e-99 UDE65516 350 7e-99 UHP67803 350 7e-99 UCR62822 350 7e-99 UBS29327 350 7e-99 UDF59775 350 7e-99 UEQ62881 350 7e-99 UDH09051 350 7e-99 UDI01781 350 7e-99 UFJ65441 350 7e-99 UFJ70576 350 7e-99 UFM52526 350 7e-99 UFM53686 350 7e-99 UFT12561 350 7e-99 UAW13899 350 7e-99 UBF90387 342 7e-99 UEA11302 350 7e-99 UGW61422 350 7e-99 UDK38702 350 7e-99 UZN15646 -
Taxonomy Report Taxonomy Number of hits Number of Organisms Description Severe acute respiratory syndrome coronavirus 2 144 1