auspice.us

auspice.us allows interactive exploration of phylogenomic datasets by simply dragging & dropping them onto this page.

Privacy: Your dataset is visualised client-side in the browser -- no data is transmitted, and no tracking cookies are used. The only data downloaded from the internet is the visualisation (JavaScript) code, fonts and any map tiles needed. This makes auspice.us appropriate to view datasets with sensitive information.

Drag & Drop a dataset on here to view

Currently supported data formats:

• Auspice JSON - see the JSON schema and the Nextstrain docs for how to run the bioinformatics tools to generate these datasets
• A phylogenetic tree in Newick format
• Additional metadata as a CSV/TSV (drop this on once the tree has loaded). See here for details.

auspice.us is part of Nextstrain, an open-source project to harness the scientific and public health potential of pathogen genome data. For more information about the software which powers these visualisations please see the Auspice documentation.

For any bugs, comments or questions, please either make a GitHub issue or create a post on the Nextstrain discussion forum. Thanks!

auspice.us 0.5.0 is built by james hadfield
and uses Auspice 2.23.0.

Nextstrain

/nextstrain/auspice.us