Phylogenetic relationships of Acheilognathidae (Cypriniformes: Cyprinoidea) as revealed from evidence of both nuclear and mitochondrial gene sequence variation: Evidence for necessary taxonomic revision in the family and the identification of cryptic species

doi:10.1016/j.ympev.2014.08.026

	Phylogenetic relationships of Acheilognathidae (Cypriniformes: Cyprinoidea) as revealed from evidence of both nuclear and mitochondrial gene sequence variation: Evidence for necessary taxonomic revision in the family and the identification of cryptic species
	Chang, Chia-Hao 1,2,3; Li, Fan 4,5; Shao, Kwang-Tsao 1; Lin, Yeong-Shin 2,6; Morosawa, Takahiro 7; Kim, Sungmin 8; Koo, Hyeyoung 9; Kim, Won 8; Lee, Jae-Seong 10; He, Shunping 11; Smith, Carl 12,13; Reichard, Martin 13; Miya, Masaki 14; Sado, Tetsuya 14; Uehara, Kazuhiko 15; Lavoue, Sebastien 16; Chen, Wei-Jen 16; Mayden, Richard L.3
	2014-12-01
Source Publication	MOLECULAR PHYLOGENETICS AND EVOLUTION
ISSN	1055-7903
Volume	81 Issue:*Pages:182-194
Abstract	Bitterlings are relatively small cypriniform species and extremely interesting evolutionarily due to their unusual reproductive behaviors and their coevolutionary relationships with freshwater mussels. As a group, they have attracted a great deal of attention in biological studies. Understanding the origin and evolution of their mating system demands a well-corroborated hypothesis of their evolutionary relationships. In this study, we provide the most comprehensive phylogenetic reconstruction of species relationships of the group based on partitioned maximum likelihood and Bayesian methods using DNA sequence variation of nuclear and mitochondrial genes on 41 species, several subspecies and three undescribed species. Our findings support the monophyly of the Acheilognathidae. Two of the three currently recognized genera are not monophyletic and the family can be subdivided into six clades. These clades are further regarded as genera based on both their phylogenetic relationships and a reappraisal of morphological characters. We present a revised classification for the Acheilognathidae with five genera/lineages: Rhodeus, Acheilognathus (new constitution), Tanakia (new constitution), Paratanakia gen. nov., and Pseudorhodeus gen. nov. and an unnamed clade containing five species currently referred to as "Acheilognathus". Gene trees of several bitterling species indicate that the taxa are not monophyletic. This result highlights a potentially dramatic underestimation of species diversity in this family. Using our new phylogenetic framework, we discuss the evolution of the Acheilognathidae relative to classification, taxonomy and biogeography. (C) 2014 Elsevier Inc. All rights reserved.
Subtype	Article
Keyword	Acheilognathinae Cyprinidae Cryptic Species Nuclear Loci Cytochrome b European Bitterling
DOI	10.1016/j.ympev.2014.08.026
WOS Headings	Science & Technology ; Life Sciences & Biomedicine
Indexed By	SCI
Language	英语
WOS Research Area	Biochemistry & Molecular Biology ; Evolutionary Biology ; Genetics & Heredity
WOS Subject	Biochemistry & Molecular Biology ; Evolutionary Biology ; Genetics & Heredity
WOS ID	WOS:000345953100017
WOS Keyword	TELEOSTEI CYPRINIDAE ; MOLECULAR PHYLOGENY ; MAXIMUM-LIKELIHOOD ; RHODEUS-SERICEUS ; BITTERLING FISH ; UNIONID MUSSELS ; SENIOR SYNONYM ; YANGTZE-RIVER ; CHINA ; EVOLUTION
引用统计	被引频次：30[WOS] [WOS记录] [WOS相关记录]
Document Type	期刊论文
Identifier	http://ir.ihb.ac.cn/handle/342005/20278
专题	水生生物多样性与资源保护研究中心_期刊论文
Affiliation	1.Acad Sinica, Biodivers Res Ctr, Taipei 11529, Taiwan 2.Natl Chiao Tung Univ, Dept Biol Sci & Technol, Hsinchu 30068, Taiwan 3.St Louis Univ, Dept Biol, St Louis, MO 63103 USA 4.Natl Sun Yat Sen Univ, Dept Oceanog, Kaohsiung 80424, Taiwan 5.Fudan Univ, Minist Educ, Key Lab Biodivers Sci & Ecol Engn, Inst Biodivers Sci, Shanghai 200433, Peoples R China 6.Natl Chino Tung Univ, Inst Bioinformat & Syst Biol, Hsinchu 30068, Taiwan 7.Japan Wildlife Res Ctr, Tokyo 1308606, Japan 8.Seoul Natl Univ, Sch Biol Sci, Seoul 151747, South Korea 9.Sangji Univ, Dept Biol Sci, Wonju 220702, South Korea 10.Sungkyunkwan Univ, Dept Biol Sci, Suwon 440746, South Korea 11.Chinese Acad Sci, Inst Hydrobiol, Key Lab Aquat Biodivers & Conservat, Wuhan 430072, Peoples R China 12.Univ St Andrews, Sch Biol, St Andrews KY16 8LB, Fife, Scotland 13.Acad Sci Czech Republic, Inst Vertebrate Biol, CS-60365 Brno, Czech Republic 14.Nat Hist Museum & Inst, Chiba 2608682, Japan 15.Res Inst Environm Agr & Fisheries, Aquat Life Conservat Res Ctr, Osaka 5720088, Japan 16.Natl Taiwan Univ, Inst Oceanog, Taipei 10617, Taiwan
推荐引用方式 GB/T 7714	Chang, Chia-Hao,Li, Fan,Shao, Kwang-Tsao,et al. Phylogenetic relationships of Acheilognathidae (Cypriniformes: Cyprinoidea) as revealed from evidence of both nuclear and mitochondrial gene sequence variation: Evidence for necessary taxonomic revision in the family and the identification of cryptic species[J]. MOLECULAR PHYLOGENETICS AND EVOLUTION,2014,81(*):182-194.
APA	Chang, Chia-Hao.,Li, Fan.,Shao, Kwang-Tsao.,Lin, Yeong-Shin.,Morosawa, Takahiro.,...&Mayden, Richard L..(2014).Phylogenetic relationships of Acheilognathidae (Cypriniformes: Cyprinoidea) as revealed from evidence of both nuclear and mitochondrial gene sequence variation: Evidence for necessary taxonomic revision in the family and the identification of cryptic species.MOLECULAR PHYLOGENETICS AND EVOLUTION,81(*),182-194.
MLA	Chang, Chia-Hao,et al."Phylogenetic relationships of Acheilognathidae (Cypriniformes: Cyprinoidea) as revealed from evidence of both nuclear and mitochondrial gene sequence variation: Evidence for necessary taxonomic revision in the family and the identification of cryptic species".MOLECULAR PHYLOGENETICS AND EVOLUTION 81.*(2014):182-194.

条目包含的文件
文件名称/大小	文献类型	版本类型	开放类型	使用许可
1-s2.0-S105579031400（517KB）	期刊论文	出版稿	开放获取	CC BY-NC-SA	浏览请求全文