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Takanori Kobayashi

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Publications

Article: Transcriptomic features associated with energy production in the muscles of Pacific bluefin tuna and Pacific cod

Mami Shibata · Miyuki Mekuchi · Kazuki Mori · Shigeru Muta · Vishwajit Sur Chowdhury · Yoji Nakamura · Nobuhiko Ojima · Kenji Saitoh · Takanori Kobayashi · Tokio Wada · Kiyoshi Inouye · Satoru Kuhara · Kosuke Tashiro

No preview · Article · Feb 2016 · Bioscience Biotechnology and Biochemistry

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Available from: sciencedirect.com

Article: A functional genomics tool for the Pacific bluefin tuna: Development of a 44K oligonucleotide microarray from whole-genome sequencing data for global transcriptome analysis

Motoshige Yasuike · Atushi Fujiwara · Yoji Nakamura · Yuki Iwasaki · Issei Nishiki · Takuma Sugaya · Akio Shimizu · Motohiko Sano · Takanori Kobayashi · Mitsuru Ototake

Full-text · Article · Oct 2015 · Gene

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Available from: Kazuharu Nomura

Article: Effective de novo assembly of fish genome using haploid larvae

Yuki Iwasaki · Issei Nishiki · Yoji Nakamura · Motoshige Yasuike · Wataru Kai · Kazuharu Nomura · Kazunori Yoshida · Yousuke Nomura · Atushi Fujiwara · Takanori Kobayashi · Mitsuru Ototake

Full-text · Article · Oct 2015 · Gene

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Available from: Satoshi Nagai

Article: V-GAP: Viral genome assembly pipeline

Yoji Nakamura · Motoshige Yasuike · Issei Nishiki · Yuki Iwasaki · Atushi Fujiwara · Yasuhiko Kawato · Toshihiro Nakai · Satoshi Nagai · Takanori Kobayashi · Takashi Gojobori · Mitsuru Ototake

Full-text · Article · Oct 2015 · Gene

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Available from: Satoshi Nagai

Article: Influences of diurnal sampling bias on fixed-point monitoring of plankton biodiversity determined using a massively parallel sequencing-based technique

Satoshi Nagai · Kohsuke Hida · Shingo Urushizaki · Goh Onitsuka · Motoshige Yasuike · Yoji Nakamura · Atushi Fujiwara · Seisuke Tajimi · Katsunori Kimoto · Takanori Kobayashi · Takashi Gojobori · Mitsuru Ototake

Full-text · Article · Oct 2015 · Gene

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Available from: static-content.springer.com

Dataset: Supplementary Table 1

Motoshige Yasuike · Issei Nishiki · Yuki Iwasaki · Yoji Nakamura · Atushi Fujiwara · Emi Sugaya · Yasuhiko Kawato · Satoshi Nagai · Takanori Kobayashi · Mitsuru Ototake · Toshihiro Nakai

No preview · Dataset · Aug 2015

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Available from: static-content.springer.com

Dataset: Supplementary Material

Motoshige Yasuike · Issei Nishiki · Yuki Iwasaki · Yoji Nakamura · Atushi Fujiwara · Emi Sugaya · Yasuhiko Kawato · Satoshi Nagai · Takanori Kobayashi · Mitsuru Ototake · Toshihiro Nakai

No preview · Dataset · Aug 2015

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Available from: Satoshi Nagai

Article: Full-genome sequence of a novel myovirus, GF-2, infecting Edwardsiella tarda: comparison with other Edwardsiella myoviral genomes

Motoshige Yasuike · Issei Nishiki · Yuki Iwasaki · Yoji Nakamura · Atushi Fujiwara · Emi Sugaya · Yasuhiko Kawato · Satoshi Nagai · Takanori Kobayashi · Mitsuru Ototake · Toshihiro Nakai

Full-text · Article · Jun 2015 · Archives of Virology

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Article: Keratin 17 is co-expressed with 14-3-3 sigma in oral carcinoma in situ and squamous cell carcinoma and modulates cell proliferation and size but not cell migration

Toshihiko Mikami · Satoshi Maruyama · Tatsuya Abé · Takanori Kobayashi · Manabu Yamazaki · Akinori Funayama · Susumu Shingaki · Tadaharu Kobayashi · Cheng Jun · Takashi Saku

No preview · Article · Mar 2015 · Archiv für Pathologische Anatomie und Physiologie und für Klinische Medicin

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Available from: Yasumitsu Kodama

Dataset: arashiyama GCOC

Takaroni Arashiyama · Yasumitsu Kodama · Takanori Kobayashi · Hideyuki Hoshina · Ritsuo Takagi · Takafumi Hayashi · Jun Cheng · Takashi Saku

Full-text · Dataset · Sep 2014

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Available from: Yasumitsu Kodama

Dataset: arashiyama GCOC

Takaroni Arashiyama · Yasumitsu Kodama · Takanori Kobayashi · Hideyuki Hoshina · Ritsuo Takagi · Takafumi Hayashi · Jun Cheng · Takashi Saku

Full-text · Dataset · Sep 2014

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Available from: Takao Ojima

Article: Characterization of an Alginate Lyase, FlAlyA, from Flavobacterium sp. Strain UMI-01 and Its Expression in Escherichia coli

Akira Inoue · Kohei Takadono · Ryuji Nishiyama · Kenji Tajima · Takanori Kobayashi · Takao Ojima

Full-text · Article · Aug 2014 · Marine Drugs

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Article: Radiation-induced undifferentiated high-grade pleomorphic sarcoma (malignant fibrous histiocytoma) of the mandible: Report of a case arising in the background of long-standing osteomyelitis with a review of the literature

Takahiro Koyama · Takanori Kobayashi · Satoshi Maruyama · Tatsuya Abé · Wael Mohamed Swelam · Yasumitu Kodama · Hideyuki Hoshina · Ritsuo Takagi · Takafumi Hayashi · Takashi Saku

No preview · Article · Jul 2014 · Pathology - Research and Practice

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Available from: Tadaharu Kobayashi

Article: Intraoperative Assessment of Surgical Margins of Oral Squamous Cell Carcinoma Using Frozen Sections: A Practical Clinicopathological Management for Recurrences

Shun Miyota · Takanori Kobayashi · Tatsuya Abé · Hisashi Miyajima · Masaki Nagata · Hideyuki Hoshina · Tadaharu Kobayashi · Ritsuo Takagi · Takashi Saku

Full-text · Article · Jun 2014 · BioMed Research International

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Article: Polyhydroxyalkanoate production by a novel bacterium Massilia sp. UMI-21 isolated from seaweed, and molecular cloning of its polyhydroxyalkanoate synthase gene

Xuerong Han · Yasuharu Satoh · Yumi Kuriki · Teruyuki Seino · Shinji Fujita · Takanori Suda · Takanori Kobayashi · Kenji Tajima

No preview · Article · Jun 2014 · Journal of Bioscience and Bioengineering

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Available from: Kazuharu Nomura

Article: A ddRAD-based genetic map and its integration with the genome assembly of Japanese eel (Anguilla japonica) provides insights into genome evolution after the teleost-specific genome duplication

Wataru Kai · Kazuharu Nomura · Atushi Fujiwara · Yoji Nakamura · Motoshige Yasuike · Nobuhiko Ojima · Tetsuji Masaoka · Akiyuki Ozaki · Yukinori Kazeto · Koichiro Gen · Jiro Nagao · Hideki Tanaka · Takanori Kobayashi · Mitsuru Ototake

Full-text · Article · Mar 2014 · BMC Genomics

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Available from: Atushi Fujiwara

Article: Complete Genome Sequence of the Edwardsiella ictaluri-Specific Bacteriophage PEi21, Isolated from River Water in Japan

Motoshige Yasuike · Wataru Kai · Yoji Nakamura · Atushi Fujiwara · Yasuhiko Kawato · Ebtsam Sayed Hassan · Mahmoud Mostafa Mahmoud · Satoshi Nagai · Takanori Kobayashi · Mitsuru Ototake · Toshihiro Nakai

Full-text · Article · Mar 2014 · Genome Announcements

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Article: Investigation of the structure and interaction of cellulose triacetate I crystal using ab initio calculations

Takanori Kobayashi · Daichi Hayakawa · Tegshjargal Khishigjargal · Kazuyoshi Ueda

No preview · Article · Feb 2014 · Carbohydrate research

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Available from: Arhab Noman

Article: ITGA3 and ITGB4 expression biomarkers estimate the risks of locoregional and hematogenous dissemination of oral squamous cell carcinoma

Masaki Nagata · Arhab A Noman · Kenji Suzuki · Hiroshi Kurita · Makoto Ohnishi · Tokio Ohyama · Nobutaka Kitamura · Takanori Kobayashi · Kohya Uematsu · Katsu Takahashi · Naoki Kodama · Tomoyuki Kawase · Hideyuki Hoshina · Nobuyuki Ikeda · Susumu Shingaki · Ritsuo Takagi

Full-text · Article · Sep 2013 · BMC Cancer

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Article: Evolutionary changes of multiple visual pigment genes in the complete genome of Pacific bluefin tuna. PNAS

Yoji Nakamura · Kazuki Mori · Kenji Saitoh · Kenshiro Oshima · Miyuki Mekuchi · Takuma Sugaya · Yuya Shigenobu · Nobuhiko Ojima · Shigeru Muta · Atushi Fujiwara · [...] · Takanori Kobayashi · Kazuhiro Nakajima · Motohiko Sano · Tokio Wada · Kosuke Tashiro · Kazuho Ikeo · Masahira Hattori · Satoru Kuhara · Takashi Gojobori · Kiyoshi Inouye ·

No preview · Article · Jun 2013 · Proceedings of the National Academy of Sciences

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9 Following View all

Takao Ojima

Hokkaido University
Kanekazu Seki

Yokohama National University
Kazuki Mori

Kyushu University
Akira Inoue

Hokkaido University
Kazuyoshi Ueda

Yokohama National University
Daichi Hayakawa

Kitasato University
Wataru Kai

Fluidigm Corporation
Yasuhiko Kawato

Fisheries Research Agency
Kaiyo Takubo

Indiana University Bloomington

28 Followers View all

Wilson Alejandro Delgado

Universidad Peruana Cayetano Heredia
Junko Aida

Tokyo Metropolitan Institute of Gerontology
Benwei Zhu

Nanjing University of Technology
Namsrai Javkhlantugs

National University of Mongolia
Songdong Shen

Soochow University (PRC)
Naobumi V. Sasaki

National Institute of Genetics
Makoto Tsubokura

Kobe University
Kanekazu Seki

Yokohama National University
Phyu Synn Oo

Miyazaki University
Daichi Hayakawa

Kitasato University

Takanori Kobayashi

Publications

Article: Transcriptomic features associated with energy production in the muscles of Pacific bluefin tuna and Pacific cod

Article: A functional genomics tool for the Pacific bluefin tuna: Development of a 44K oligonucleotide microarray from whole-genome sequencing data for global transcriptome analysis

Article: Effective de novo assembly of fish genome using haploid larvae

Article: V-GAP: Viral genome assembly pipeline

Article: Influences of diurnal sampling bias on fixed-point monitoring of plankton biodiversity determined using a massively parallel sequencing-based technique

Dataset: Supplementary Table 1

Dataset: Supplementary Material

Article: Full-genome sequence of a novel myovirus, GF-2, infecting Edwardsiella tarda: comparison with other Edwardsiella myoviral genomes

Article: Keratin 17 is co-expressed with 14-3-3 sigma in oral carcinoma in situ and squamous cell carcinoma and modulates cell proliferation and size but not cell migration

Dataset: arashiyama GCOC

Dataset: arashiyama GCOC

Article: Characterization of an Alginate Lyase, FlAlyA, from Flavobacterium sp. Strain UMI-01 and Its Expression in Escherichia coli

Article: Radiation-induced undifferentiated high-grade pleomorphic sarcoma (malignant fibrous histiocytoma) of the mandible: Report of a case arising in the background of long-standing osteomyelitis with a review of the literature

Article: Intraoperative Assessment of Surgical Margins of Oral Squamous Cell Carcinoma Using Frozen Sections: A Practical Clinicopathological Management for Recurrences

Article: Polyhydroxyalkanoate production by a novel bacterium Massilia sp. UMI-21 isolated from seaweed, and molecular cloning of its polyhydroxyalkanoate synthase gene

Article: A ddRAD-based genetic map and its integration with the genome assembly of Japanese eel (Anguilla japonica) provides insights into genome evolution after the teleost-specific genome duplication

Article: Complete Genome Sequence of the Edwardsiella ictaluri-Specific Bacteriophage PEi21, Isolated from River Water in Japan

Article: Investigation of the structure and interaction of cellulose triacetate I crystal using ab initio calculations

Article: ITGA3 and ITGB4 expression biomarkers estimate the risks of locoregional and hematogenous dissemination of oral squamous cell carcinoma

Article: Evolutionary changes of multiple visual pigment genes in the complete genome of Pacific bluefin tuna. PNAS

Top co-authors View all

Motoshige Yasuike (25)

Yuya Shigenobu (17)

Ritsuo Takagi (15)

Kazuho Ikeo (14)

Naobumi V. Sasaki (13)

9 Following View all

28 Followers View all

Publications

Article: Transcriptomic features associated with energy production in the muscles of Pacific bluefin tuna and Pacific cod

Article: A functional genomics tool for the Pacific bluefin tuna: Development of a 44K oligonucleotide microarray from whole-genome sequencing data for global transcriptome analysis

Article: Effective de novo assembly of fish genome using haploid larvae

Article: V-GAP: Viral genome assembly pipeline

Article: Influences of diurnal sampling bias on fixed-point monitoring of plankton biodiversity determined using a massively parallel sequencing-based technique

Dataset: Supplementary Table 1

Dataset: Supplementary Material

Article: Full-genome sequence of a novel myovirus, GF-2, infecting Edwardsiella tarda: comparison with other Edwardsiella myoviral genomes

Article: Keratin 17 is co-expressed with 14-3-3 sigma in oral carcinoma in situ and squamous cell carcinoma and modulates cell proliferation and size but not cell migration

Dataset: arashiyama GCOC

Dataset: arashiyama GCOC

Article: Characterization of an Alginate Lyase, FlAlyA, from Flavobacterium sp. Strain UMI-01 and Its Expression in Escherichia coli

Article: Radiation-induced undifferentiated high-grade pleomorphic sarcoma (malignant fibrous histiocytoma) of the mandible: Report of a case arising in the background of long-standing osteomyelitis with a review of the literature

Article: Intraoperative Assessment of Surgical Margins of Oral Squamous Cell Carcinoma Using Frozen Sections: A Practical Clinicopathological Management for Recurrences

Article: Polyhydroxyalkanoate production by a novel bacterium Massilia sp. UMI-21 isolated from seaweed, and molecular cloning of its polyhydroxyalkanoate synthase gene

Article: A ddRAD-based genetic map and its integration with the genome assembly of Japanese eel (Anguilla japonica) provides insights into genome evolution after the teleost-specific genome duplication

Article: Complete Genome Sequence of the Edwardsiella ictaluri-Specific Bacteriophage PEi21, Isolated from River Water in Japan

Article: Investigation of the structure and interaction of cellulose triacetate I crystal using ab initio calculations

Article: ITGA3 and ITGB4 expression biomarkers estimate the risks of locoregional and hematogenous dissemination of oral squamous cell carcinoma

Article: Evolutionary changes of multiple visual pigment genes in the complete genome of Pacific bluefin tuna. PNAS

Top co-authors View all

Read 85 publicationsby Takanori Kobayashi

Read 85 publications
by Takanori Kobayashi