182 9.09 18.18 0.00 UnnamedSequence 93 125 (45175) C AmnSINE1#SINE/5S-Deu-L2 (186) 389 351 m_b1s601i0 1 UnnamedSequen 93 TACCGTA-CCAAT-----CTGTAGGAGGAATTTAGATAG 125 - ----- i i i C AmnSINE1#SINE 389 TACCGTATCCAATTGAAACTGCAGGGGGAATTTAGGTAG 351 Matrix = 25p35g.matrix Kimura (with divCpGMod) = 10.03 Transitions / transversions = 1.00 (3/0) Gap_init rate = 0.06 (2 / 32), avg. gap size = 3.00 (6 / 2) 13 21.76 2.63 0.00 UnnamedSequence 1067 1104 (44196) (ATCCGG)n#Simple_repeat 1 39 (0) m_b1s252i0 2 UnnamedSequen 1067 ATCC-GACCCGGAACCGGATCCGAACCCGGAATCGAATC 1104 - i v i i vi i (ATCCGG)n#Sim 1 ATCCGGATCCGGATCCGGATCCGGATCCGGATCCGGATC 39 Matrix = Unknown Transitions / transversions = 2.50 (5/2) Gap_init rate = 0.03 (1 / 37), avg. gap size = 1.00 (1 / 1) 13 5.20 0.00 0.00 UnnamedSequence 1141 1160 (44140) (AGA)n#Simple_repeat 1 20 (0) m_b1s252i1 3 UnnamedSequen 1141 AGAAGAAGAAGAAGACGAAG 1160 v (AGA)n#Simple 1 AGAAGAAGAAGAAGAAGAAG 20 Matrix = Unknown Transitions / transversions = 0.00 (0/1) Gap_init rate = 0.00 (0 / 19), avg. gap size = 0.0 (0 / 0) 28 15.02 3.70 5.00 UnnamedSequence 4912 4992 (40308) (ACAAATC)n#Simple_repeat 1 80 (0) m_b1s252i2 4 UnnamedSequen 4912 ACAAAACCAAAATCA-AAATCACAAATCATAAGATCTACCAAATCACAAA 4960 v vv - i - - - (ACAAATC)n#Si 1 ACAAATCACAAATCACAAATCACAAATCACAA-ATC-A-CAAATCACAAA 47 UnnamedSequen 4961 TC-GAAATCATCAAACTATACA-CACAAAACACA 4992 -v - ii i v - v (ACAAATC)n#Si 48 TCACAAATCA-CAAATCACAAATCACAAATCACA 80 Matrix = Unknown Transitions / transversions = 0.67 (4/6) Gap_init rate = 0.09 (7 / 80), avg. gap size = 1.00 (7 / 7) 16 4.55 4.35 0.00 UnnamedSequence 5713 5735 (39565) (AG)n#Simple_repeat 1 24 (0) m_b1s252i3 5 UnnamedSequen 5713 AGA-AGAAAGAGAGAGAGAGAGAG 5735 - i (AG)n#Simple_ 1 AGAGAGAGAGAGAGAGAGAGAGAG 24 Matrix = Unknown Transitions / transversions = 1.00 (1/0) Gap_init rate = 0.05 (1 / 22), avg. gap size = 1.00 (1 / 1) 16 5.27 0.00 0.00 UnnamedSequence 6319 6338 (38962) (TC)n#Simple_repeat 1 20 (0) m_b1s252i4 6 UnnamedSequen 6319 TCTCTCTTTCTCTCTCTCTC 6338 i (TC)n#Simple_ 1 TCTCTCTCTCTCTCTCTCTC 20 Matrix = Unknown Transitions / transversions = 1.00 (1/0) Gap_init rate = 0.00 (0 / 19), avg. gap size = 0.0 (0 / 0) 14 18.47 6.98 0.00 UnnamedSequence 13719 13761 (31539) (CTT)n#Simple_repeat 1 46 (0) m_b1s252i5 7 UnnamedSequen 13719 CTTCTTCTTCTTCGT-TTC-GCTTCTTCAACGTC-TCTCCTTGTTC 13761 v - -v vv v - i v (CTT)n#Simple 1 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC 46 Matrix = Unknown Transitions / transversions = 0.17 (1/6) Gap_init rate = 0.07 (3 / 42), avg. gap size = 1.00 (3 / 3) 12 32.28 0.00 1.82 UnnamedSequence 17263 17318 (27982) (AAAGAG)n#Simple_repeat 1 55 (0) m_b1s252i6 8 UnnamedSequen 17263 AAATACAAAAATCAAGAAAAGGACAAAAAAACAAGAAACAGAGGAAGAGA 17312 v v i vv i i v i i - i v i (AAAGAG)n#Sim 1 AAAGAGAAAGAGAAAGAGAAAGAGAAAGAGA-AAGAGAAAGAGAAAGAGA 49 UnnamedSequen 17313 GAGAGA 17318 i (AAAGAG)n#Sim 50 AAGAGA 55 Matrix = Unknown Transitions / transversions = 1.33 (8/6) Gap_init rate = 0.02 (1 / 55), avg. gap size = 1.00 (1 / 1) 13 8.48 4.00 0.00 UnnamedSequence 17468 17492 (27808) (TGTTT)n#Simple_repeat 1 26 (0) m_b1s252i7 9 UnnamedSequen 17468 TGTTTTGTTTTGTTTT-TCTAGTTTT 17492 - i v (TGTTT)n#Simp 1 TGTTTTGTTTTGTTTTGTTTTGTTTT 26 Matrix = Unknown Transitions / transversions = 1.00 (1/1) Gap_init rate = 0.04 (1 / 24), avg. gap size = 1.00 (1 / 1) 31 5.48 0.00 0.00 UnnamedSequence 21795 21832 (23505) (GCTGGG)n#Simple_repeat 1 38 (0) c_b1s251i0 10 UnnamedSequen 21795 GCTGGGGCTTGGGCTTGGGCTGGGGCTGGGGCTGGGGC 21832 v v (GCTGGG)n#Sim 1 GCTGGGGCTGGGGCTGGGGCTGGGGCTGGGGCTGGGGC 38 Matrix = Unknown Transitions / transversions = 0.00 (0/2) Gap_init rate = 0.00 (0 / 37), avg. gap size = 0.0 (0 / 0) 13 12.17 3.70 0.00 UnnamedSequence 24659 24685 (20652) (CAT)n#Simple_repeat 1 28 (0) m_b1s252i8 11 UnnamedSequen 24659 CATCTTCAGAATC-TCATCATCATCATC 24685 v vv - (CAT)n#Simple 1 CATCATCATCATCATCATCATCATCATC 28 Matrix = Unknown Transitions / transversions = 0.00 (0/3) Gap_init rate = 0.04 (1 / 26), avg. gap size = 1.00 (1 / 1) 32 17.89 1.79 8.57 UnnamedSequence 25169 25280 (20057) (GAA)n#Simple_repeat 1 105 (0) m_b1s252i9 12 UnnamedSequen 25169 GAAGGCGAACGAAGAAGAAGAAG-AGAGAGGAGAAATGGTAAGAAGAAGA 25217 iv - - - i ivi - (GAA)n#Simple 1 GAAGAAGAA-GAAGAAGAAGAAGAAGA-AGAAGAAGAAG-AAGAAGAAGA 47 UnnamedSequen 25218 GAGATTAAGAAGAAGGAAGAAGAGGAAGATG-AGAATGGATGGAGGAGAA 25266 - vv - i v - -- v i i (GAA)n#Simple 48 -AGAAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAA--GAAGAAGAAGAA 93 UnnamedSequen 25267 AACAGAGGAGAGAA 25280 i - i - (GAA)n#Simple 94 GA-AGAAGA-AGAA 105 Matrix = Unknown Transitions / transversions = 1.50 (9/6) Gap_init rate = 0.10 (11 / 111), avg. gap size = 1.00 (11 / 11) 25 19.33 0.00 3.64 UnnamedSequence 34866 34922 (10415) (AT)n#Simple_repeat 1 55 (0) m_b1s252i10 13 UnnamedSequen 34866 ATAAATATATCTCTATATATATATATATATGGTATATTTTTGATCAAAAT 34915 v v v -i v v - vv v (AT)n#Simple_ 1 ATATATATATATATATATATATATATATAT-ATATATATAT-ATATATAT 48 UnnamedSequen 34916 ATATATA 34922 (AT)n#Simple_ 49 ATATATA 55 Matrix = Unknown Transitions / transversions = 0.12 (1/8) Gap_init rate = 0.04 (2 / 56), avg. gap size = 1.00 (2 / 2) 18 25.83 5.15 3.03 UnnamedSequence 35173 35269 (10068) (ATGAAA)n#Simple_repeat 1 99 (0) m_b1s252i11 14 UnnamedSequen 35173 ATGAGAATTAAAAGGAAAATG--AATAAAAAGGAACA-G-AAATGAGAAA 35218 i v v -- i v v - - - (ATGAAA)n#Sim 1 ATGAAAATGAAAATGAAAATGAAAATGAAAATGAAAATGAAAATGA-AAA 49 UnnamedSequen 35219 TGAAGA-GAAATATGTCATTGACGAAAAAAAAAAAAAAAAAAGAGAAATA 35267 i - - vv v vi vi vi vi iv - (ATGAAA)n#Sim 50 TGAAAATGAAA-ATGAAAATGAAAATGAAAATGAAAATGAAAATGAAA-A 97 UnnamedSequen 35268 TG 35269 (ATGAAA)n#Sim 98 TG 99 Matrix = Unknown Transitions / transversions = 0.67 (8/12) Gap_init rate = 0.07 (7 / 96), avg. gap size = 1.14 (8 / 7) 17 9.12 0.00 0.00 UnnamedSequence 35242 35265 (10072) (A)n#Simple_repeat 1 24 (0) m_b1s252i12 15 UnnamedSequen 35242 AAAAAAAAAAAAAAAAAAGAGAAA 35265 i i (A)n#Simple_r 1 AAAAAAAAAAAAAAAAAAAAAAAA 24 Matrix = Unknown Transitions / transversions = 1.00 (2/0) Gap_init rate = 0.00 (0 / 23), avg. gap size = 0.0 (0 / 0) 17 14.21 0.00 0.00 UnnamedSequence 39715 39745 (5592) (AAG)n#Simple_repeat 1 31 (0) m_b1s252i13 16 UnnamedSequen 39715 AAGAATAAGAAGAAGAAGAAGAACAGAAAGA 39745 v v ii (AAG)n#Simple 1 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 31 Matrix = Unknown Transitions / transversions = 1.00 (2/2) Gap_init rate = 0.00 (0 / 30), avg. gap size = 0.0 (0 / 0) 18 17.57 0.00 0.00 UnnamedSequence 42953 42984 (2353) (A)n#Simple_repeat 1 32 (0) m_b1s252i14 17 UnnamedSequen 42953 AATAAAAAAAACAAAAAACAGAAAACAAAAAA 42984 v v v i v (A)n#Simple_r 1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 32 Matrix = Unknown Transitions / transversions = 0.25 (1/4) Gap_init rate = 0.00 (0 / 31), avg. gap size = 0.0 (0 / 0) 12 8.09 0.00 10.34 UnnamedSequence 43510 43541 (1796) (CTT)n#Simple_repeat 1 29 (0) m_b1s252i15 18 UnnamedSequen 43510 CTTCTTCTCCTTCATAACTTCTTTCTTCTTCT 43541 i - -v - (CTT)n#Simple 1 CTTCTTCTTCTTC-T-TCTTC-TTCTTCTTCT 29 Matrix = Unknown Transitions / transversions = 1.00 (1/1) Gap_init rate = 0.10 (3 / 31), avg. gap size = 1.00 (3 / 3) 13 18.17 0.00 7.50 UnnamedSequence 44848 44890 (447) (AAGAA)n#Simple_repeat 1 40 (0) m_b1s252i16 19 UnnamedSequen 44848 AAGAACACGAAATTGATTATAAAAAAAAAGAAAAGAAAGAGAA 44890 - v -v vv v i - (AAGAA)n#Simp 1 AAGAA-AAGAAA-AGAAAAGAAAAGAAAAGAAAAGAAA-AGAA 40 Matrix = Unknown Transitions / transversions = 0.20 (1/5) Gap_init rate = 0.07 (3 / 42), avg. gap size = 1.00 (3 / 3)